Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRK2Q5S007 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRK2Q5S007 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.56■□□□□ 0.24
LRRK2Q5S007 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
LRRK2Q5S007 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRK2Q5S007 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LRRK2Q5S007 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LRRK2Q5S007 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRK2Q5S007 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LRRK2Q5S007 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRK2Q5S007 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRK2Q5S007 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.56■□□□□ 0.24
LRRK2Q5S007 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.56■□□□□ 0.24
LRRK2Q5S007 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.56■□□□□ 0.24
LRRK2Q5S007 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
LRRK2Q5S007 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
LRRK2Q5S007 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRK2Q5S007 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LRRK2Q5S007 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.56■□□□□ 0.24
LRRK2Q5S007 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRK2Q5S007 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.55■□□□□ 0.24
LRRK2Q5S007 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRK2Q5S007 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
LRRK2Q5S007 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRK2Q5S007 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRRK2Q5S007 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LRRK2Q5S007 YBX2P1-201ENST00000394192 760 ntBASIC16.55■□□□□ 0.24
LRRK2Q5S007 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.55■□□□□ 0.24
LRRK2Q5S007 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
LRRK2Q5S007 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.55■□□□□ 0.24
LRRK2Q5S007 AC079602.3-201ENST00000623931 403 ntBASIC16.55■□□□□ 0.24
LRRK2Q5S007 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.55■□□□□ 0.24
LRRK2Q5S007 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.55■□□□□ 0.24
LRRK2Q5S007 FP700111.2-201ENST00000619190 1892 ntBASIC16.55■□□□□ 0.24
LRRK2Q5S007 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.55■□□□□ 0.24
LRRK2Q5S007 AC004832.2-201ENST00000426397 482 ntBASIC16.55■□□□□ 0.24
LRRK2Q5S007 DNAJB3-202ENST00000449667 1266 ntBASIC16.55■□□□□ 0.24
LRRK2Q5S007 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRRK2Q5S007 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.55■□□□□ 0.24
LRRK2Q5S007 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LRRK2Q5S007 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.55■□□□□ 0.24
LRRK2Q5S007 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.55■□□□□ 0.24
LRRK2Q5S007 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRK2Q5S007 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRRK2Q5S007 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRK2Q5S007 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC16.54■□□□□ 0.24
LRRK2Q5S007 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRK2Q5S007 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRK2Q5S007 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRK2Q5S007 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRRK2Q5S007 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRK2Q5S007 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.54■□□□□ 0.24
LRRK2Q5S007 VENTXP7-201ENST00000475503 772 ntBASIC16.54■□□□□ 0.24
LRRK2Q5S007 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.54■□□□□ 0.24
LRRK2Q5S007 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.54■□□□□ 0.24
LRRK2Q5S007 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.54■□□□□ 0.24
LRRK2Q5S007 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.54■□□□□ 0.24
LRRK2Q5S007 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRK2Q5S007 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRK2Q5S007 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRK2Q5S007 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
LRRK2Q5S007 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRK2Q5S007 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRRK2Q5S007 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRK2Q5S007 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRK2Q5S007 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRK2Q5S007 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRK2Q5S007 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRK2Q5S007 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRK2Q5S007 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRK2Q5S007 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRRK2Q5S007 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRK2Q5S007 HLA-J-203ENST00000494367 1087 ntBASIC16.54■□□□□ 0.24
LRRK2Q5S007 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.54■□□□□ 0.24
LRRK2Q5S007 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.54■□□□□ 0.24
LRRK2Q5S007 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRK2Q5S007 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRK2Q5S007 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRK2Q5S007 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRK2Q5S007 FEM1AP1-201ENST00000431297 1995 ntBASIC16.53■□□□□ 0.24
LRRK2Q5S007 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRK2Q5S007 HNRNPDP1-201ENST00000439535 754 ntBASIC16.53■□□□□ 0.24
LRRK2Q5S007 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRK2Q5S007 AC091607.1-201ENST00000490318 1060 ntBASIC16.53■□□□□ 0.24
LRRK2Q5S007 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRK2Q5S007 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.53■□□□□ 0.24
LRRK2Q5S007 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.53■□□□□ 0.24
LRRK2Q5S007 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRK2Q5S007 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRK2Q5S007 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRK2Q5S007 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LRRK2Q5S007 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.53■□□□□ 0.24
LRRK2Q5S007 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LRRK2Q5S007 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRK2Q5S007 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRK2Q5S007 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.53■□□□□ 0.24
LRRK2Q5S007 HLA-J-202ENST00000469281 1241 ntBASIC16.53■□□□□ 0.24
LRRK2Q5S007 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.53■□□□□ 0.24
LRRK2Q5S007 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
LRRK2Q5S007 Z98882.1-201ENST00000622160 2253 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms