Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
H3F3AP84243 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
H3F3AP84243 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.07■□□□□ 0.32
H3F3AP84243 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.07■□□□□ 0.32
H3F3AP84243 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.07■□□□□ 0.32
H3F3AP84243 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.07■□□□□ 0.32
H3F3AP84243 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
H3F3AP84243 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H3F3AP84243 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
H3F3AP84243 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.07■□□□□ 0.32
H3F3AP84243 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H3F3AP84243 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
H3F3AP84243 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
H3F3AP84243 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H3F3AP84243 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H3F3AP84243 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H3F3AP84243 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H3F3AP84243 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H3F3AP84243 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.06■□□□□ 0.32
H3F3AP84243 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H3F3AP84243 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.06■□□□□ 0.32
H3F3AP84243 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
H3F3AP84243 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H3F3AP84243 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H3F3AP84243 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
H3F3AP84243 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.06■□□□□ 0.32
H3F3AP84243 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H3F3AP84243 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
H3F3AP84243 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
H3F3AP84243 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.06■□□□□ 0.32
H3F3AP84243 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
H3F3AP84243 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
H3F3AP84243 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.06■□□□□ 0.32
H3F3AP84243 CKBP1-201ENST00000565489 1086 ntBASIC17.06■□□□□ 0.32
H3F3AP84243 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.06■□□□□ 0.32
H3F3AP84243 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
H3F3AP84243 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
H3F3AP84243 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H3F3AP84243 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
H3F3AP84243 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H3F3AP84243 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
H3F3AP84243 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H3F3AP84243 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.06■□□□□ 0.32
H3F3AP84243 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
H3F3AP84243 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
H3F3AP84243 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
H3F3AP84243 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
H3F3AP84243 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
H3F3AP84243 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.05■□□□□ 0.32
H3F3AP84243 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
H3F3AP84243 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
H3F3AP84243 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.05■□□□□ 0.32
H3F3AP84243 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H3F3AP84243 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
H3F3AP84243 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
H3F3AP84243 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H3F3AP84243 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H3F3AP84243 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
H3F3AP84243 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
H3F3AP84243 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.05■□□□□ 0.32
H3F3AP84243 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
H3F3AP84243 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.05■□□□□ 0.32
H3F3AP84243 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.05■□□□□ 0.32
H3F3AP84243 RBM17P1-201ENST00000453646 1190 ntBASIC17.05■□□□□ 0.32
H3F3AP84243 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
H3F3AP84243 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.05■□□□□ 0.32
H3F3AP84243 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.05■□□□□ 0.32
H3F3AP84243 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.05■□□□□ 0.32
H3F3AP84243 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.05■□□□□ 0.32
H3F3AP84243 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
H3F3AP84243 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H3F3AP84243 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
H3F3AP84243 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
H3F3AP84243 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
H3F3AP84243 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
H3F3AP84243 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
H3F3AP84243 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H3F3AP84243 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.05■□□□□ 0.32
H3F3AP84243 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
H3F3AP84243 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.05■□□□□ 0.32
H3F3AP84243 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.04■□□□□ 0.32
H3F3AP84243 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
H3F3AP84243 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
H3F3AP84243 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
H3F3AP84243 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
H3F3AP84243 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
H3F3AP84243 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
H3F3AP84243 AL161938.1-201ENST00000569833 2180 ntBASIC17.04■□□□□ 0.32
H3F3AP84243 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
H3F3AP84243 UNC93B2-201ENST00000285383 730 ntBASIC17.04■□□□□ 0.32
H3F3AP84243 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
H3F3AP84243 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.04■□□□□ 0.32
H3F3AP84243 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
H3F3AP84243 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.04■□□□□ 0.32
H3F3AP84243 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.04■□□□□ 0.32
H3F3AP84243 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.04■□□□□ 0.32
H3F3AP84243 AL355075.4-201ENST00000554988 638 ntBASIC17.04■□□□□ 0.32
H3F3AP84243 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
H3F3AP84243 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
H3F3AP84243 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms