Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H3AP68431 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H3AP68431 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H3AP68431 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H3AP68431 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H3AP68431 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HIST1H3AP68431 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
HIST1H3AP68431 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HIST1H3AP68431 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
HIST1H3AP68431 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H3AP68431 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H3AP68431 AC093525.10-201ENST00000625130 1569 ntBASIC16.68■□□□□ 0.26
HIST1H3AP68431 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H3AP68431 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H3AP68431 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H3AP68431 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H3AP68431 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H3AP68431 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.67■□□□□ 0.26
HIST1H3AP68431 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H3AP68431 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H3AP68431 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.67■□□□□ 0.26
HIST1H3AP68431 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H3AP68431 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H3AP68431 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HIST1H3AP68431 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.67■□□□□ 0.26
HIST1H3AP68431 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H3AP68431 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H3AP68431 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H3AP68431 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HIST1H3AP68431 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H3AP68431 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.67■□□□□ 0.26
HIST1H3AP68431 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.67■□□□□ 0.26
HIST1H3AP68431 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.67■□□□□ 0.26
HIST1H3AP68431 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HIST1H3AP68431 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.67■□□□□ 0.26
HIST1H3AP68431 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H3AP68431 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.67■□□□□ 0.26
HIST1H3AP68431 AL138781.2-201ENST00000617896 1843 ntBASIC16.67■□□□□ 0.26
HIST1H3AP68431 AC004408.2-201ENST00000623613 2777 ntBASIC16.67■□□□□ 0.26
HIST1H3AP68431 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H3AP68431 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HIST1H3AP68431 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H3AP68431 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HIST1H3AP68431 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HIST1H3AP68431 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H3AP68431 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H3AP68431 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H3AP68431 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.67■□□□□ 0.26
HIST1H3AP68431 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HIST1H3AP68431 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H3AP68431 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H3AP68431 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HIST1H3AP68431 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.66■□□□□ 0.26
HIST1H3AP68431 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.66■□□□□ 0.26
HIST1H3AP68431 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H3AP68431 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H3AP68431 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H3AP68431 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H3AP68431 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H3AP68431 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HIST1H3AP68431 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
HIST1H3AP68431 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H3AP68431 KRT16P1-201ENST00000399124 1418 ntBASIC16.66■□□□□ 0.26
HIST1H3AP68431 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.66■□□□□ 0.26
HIST1H3AP68431 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H3AP68431 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H3AP68431 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H3AP68431 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.66■□□□□ 0.26
HIST1H3AP68431 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.66■□□□□ 0.26
HIST1H3AP68431 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
HIST1H3AP68431 AC026271.3-201ENST00000571884 352 ntBASIC16.66■□□□□ 0.26
HIST1H3AP68431 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.66■□□□□ 0.26
HIST1H3AP68431 AC073195.1-201ENST00000607241 877 ntBASIC16.66■□□□□ 0.26
HIST1H3AP68431 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.66■□□□□ 0.26
HIST1H3AP68431 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.66■□□□□ 0.26
HIST1H3AP68431 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H3AP68431 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H3AP68431 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H3AP68431 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H3AP68431 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H3AP68431 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H3AP68431 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
HIST1H3AP68431 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H3AP68431 KRT8P11-201ENST00000409686 1436 ntBASIC16.65■□□□□ 0.26
HIST1H3AP68431 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.65■□□□□ 0.26
HIST1H3AP68431 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H3AP68431 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H3AP68431 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H3AP68431 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.65■□□□□ 0.26
HIST1H3AP68431 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H3AP68431 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.65■□□□□ 0.26
HIST1H3AP68431 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HIST1H3AP68431 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H3AP68431 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.65■□□□□ 0.26
HIST1H3AP68431 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H3AP68431 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H3AP68431 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.65■□□□□ 0.26
HIST1H3AP68431 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H3AP68431 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H3AP68431 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms