Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SKP1P63208 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SKP1P63208 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
SKP1P63208 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SKP1P63208 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.12■□□□□ 0.49
SKP1P63208 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.12■□□□□ 0.49
SKP1P63208 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SKP1P63208 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.12■□□□□ 0.49
SKP1P63208 C2orf69P3-201ENST00000565542 1120 ntBASIC18.12■□□□□ 0.49
SKP1P63208 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.12■□□□□ 0.49
SKP1P63208 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SKP1P63208 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.12■□□□□ 0.49
SKP1P63208 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SKP1P63208 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SKP1P63208 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
SKP1P63208 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SKP1P63208 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SKP1P63208 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SKP1P63208 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SKP1P63208 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SKP1P63208 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SKP1P63208 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SKP1P63208 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SKP1P63208 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SKP1P63208 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SKP1P63208 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.11■□□□□ 0.49
SKP1P63208 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.11■□□□□ 0.49
SKP1P63208 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SKP1P63208 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
SKP1P63208 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.11■□□□□ 0.49
SKP1P63208 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SKP1P63208 CRYGFP-201ENST00000418459 633 ntBASIC18.11■□□□□ 0.49
SKP1P63208 MFAP1P1-201ENST00000442257 1255 ntBASIC18.11■□□□□ 0.49
SKP1P63208 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.11■□□□□ 0.49
SKP1P63208 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SKP1P63208 FITM1-202ENST00000559294 800 ntBASIC18.11■□□□□ 0.49
SKP1P63208 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.11■□□□□ 0.49
SKP1P63208 CKBP1-201ENST00000565489 1086 ntBASIC18.11■□□□□ 0.49
SKP1P63208 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SKP1P63208 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.11■□□□□ 0.49
SKP1P63208 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SKP1P63208 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SKP1P63208 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.11■□□□□ 0.49
SKP1P63208 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SKP1P63208 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.11■□□□□ 0.49
SKP1P63208 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SKP1P63208 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.11■□□□□ 0.49
SKP1P63208 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
SKP1P63208 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SKP1P63208 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.11■□□□□ 0.49
SKP1P63208 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.11■□□□□ 0.49
SKP1P63208 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.11■□□□□ 0.49
SKP1P63208 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SKP1P63208 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SKP1P63208 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SKP1P63208 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SKP1P63208 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SKP1P63208 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SKP1P63208 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.1■□□□□ 0.49
SKP1P63208 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SKP1P63208 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SKP1P63208 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.1■□□□□ 0.49
SKP1P63208 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.1■□□□□ 0.49
SKP1P63208 MMP23A-201ENST00000234610 1017 ntBASIC18.1■□□□□ 0.49
SKP1P63208 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SKP1P63208 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SKP1P63208 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.1■□□□□ 0.49
SKP1P63208 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SKP1P63208 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.1■□□□□ 0.49
SKP1P63208 BX088651.1-201ENST00000540551 451 ntBASIC18.1■□□□□ 0.49
SKP1P63208 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.1■□□□□ 0.49
SKP1P63208 AP000525.1-201ENST00000608286 694 ntBASIC18.1■□□□□ 0.49
SKP1P63208 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.1■□□□□ 0.49
SKP1P63208 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SKP1P63208 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.1■□□□□ 0.49
SKP1P63208 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
SKP1P63208 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SKP1P63208 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SKP1P63208 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SKP1P63208 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SKP1P63208 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SKP1P63208 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.09■□□□□ 0.49
SKP1P63208 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SKP1P63208 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SKP1P63208 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.09■□□□□ 0.49
SKP1P63208 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SKP1P63208 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SKP1P63208 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SKP1P63208 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SKP1P63208 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SKP1P63208 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.09■□□□□ 0.49
SKP1P63208 MIR1238-201ENST00000408483 83 ntBASIC18.09■□□□□ 0.49
SKP1P63208 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SKP1P63208 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
SKP1P63208 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.09■□□□□ 0.49
SKP1P63208 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.09■□□□□ 0.49
SKP1P63208 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.09■□□□□ 0.49
SKP1P63208 CA15P1-201ENST00000481698 905 ntBASIC18.09■□□□□ 0.49
SKP1P63208 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SKP1P63208 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms