Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NCKAP1LP55160 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NCKAP1LP55160 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NCKAP1LP55160 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.9■□□□□ 0.94
NCKAP1LP55160 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.9■□□□□ 0.94
NCKAP1LP55160 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.9■□□□□ 0.94
NCKAP1LP55160 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NCKAP1LP55160 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.9■□□□□ 0.94
NCKAP1LP55160 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NCKAP1LP55160 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.9■□□□□ 0.94
NCKAP1LP55160 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NCKAP1LP55160 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NCKAP1LP55160 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NCKAP1LP55160 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NCKAP1LP55160 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NCKAP1LP55160 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NCKAP1LP55160 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
NCKAP1LP55160 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NCKAP1LP55160 AL049812.1-201ENST00000432563 2267 ntBASIC20.89■□□□□ 0.94
NCKAP1LP55160 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.89■□□□□ 0.94
NCKAP1LP55160 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.89■□□□□ 0.94
NCKAP1LP55160 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
NCKAP1LP55160 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NCKAP1LP55160 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.89■□□□□ 0.93
NCKAP1LP55160 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCKAP1LP55160 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
NCKAP1LP55160 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
NCKAP1LP55160 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCKAP1LP55160 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NCKAP1LP55160 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCKAP1LP55160 TSPY14P-201ENST00000303979 915 ntBASIC20.89■□□□□ 0.93
NCKAP1LP55160 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.89■□□□□ 0.93
NCKAP1LP55160 NAPSB-206ENST00000562112 1266 ntBASIC20.89■□□□□ 0.93
NCKAP1LP55160 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.89■□□□□ 0.93
NCKAP1LP55160 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.89■□□□□ 0.93
NCKAP1LP55160 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.89■□□□□ 0.93
NCKAP1LP55160 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
NCKAP1LP55160 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCKAP1LP55160 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCKAP1LP55160 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NCKAP1LP55160 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCKAP1LP55160 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.89■□□□□ 0.93
NCKAP1LP55160 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
NCKAP1LP55160 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCKAP1LP55160 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
NCKAP1LP55160 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCKAP1LP55160 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCKAP1LP55160 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.89■□□□□ 0.93
NCKAP1LP55160 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NCKAP1LP55160 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.89■□□□□ 0.93
NCKAP1LP55160 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.88■□□□□ 0.93
NCKAP1LP55160 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NCKAP1LP55160 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NCKAP1LP55160 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.88■□□□□ 0.93
NCKAP1LP55160 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NCKAP1LP55160 KRT8P3-201ENST00000519669 1449 ntBASIC20.88■□□□□ 0.93
NCKAP1LP55160 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
NCKAP1LP55160 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
NCKAP1LP55160 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NCKAP1LP55160 SLC25A1P2-201ENST00000430693 912 ntBASIC20.88■□□□□ 0.93
NCKAP1LP55160 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NCKAP1LP55160 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.88■□□□□ 0.93
NCKAP1LP55160 C2orf69P3-201ENST00000565542 1120 ntBASIC20.88■□□□□ 0.93
NCKAP1LP55160 AL023803.3-201ENST00000615559 522 ntBASIC20.88■□□□□ 0.93
NCKAP1LP55160 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.88■□□□□ 0.93
NCKAP1LP55160 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.88■□□□□ 0.93
NCKAP1LP55160 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NCKAP1LP55160 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NCKAP1LP55160 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.87■□□□□ 0.93
NCKAP1LP55160 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NCKAP1LP55160 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCKAP1LP55160 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCKAP1LP55160 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NCKAP1LP55160 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCKAP1LP55160 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
NCKAP1LP55160 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.87■□□□□ 0.93
NCKAP1LP55160 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCKAP1LP55160 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
NCKAP1LP55160 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.87■□□□□ 0.93
NCKAP1LP55160 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.87■□□□□ 0.93
NCKAP1LP55160 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCKAP1LP55160 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NCKAP1LP55160 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCKAP1LP55160 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCKAP1LP55160 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCKAP1LP55160 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NCKAP1LP55160 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCKAP1LP55160 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCKAP1LP55160 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCKAP1LP55160 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCKAP1LP55160 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCKAP1LP55160 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCKAP1LP55160 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.86■□□□□ 0.93
NCKAP1LP55160 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
NCKAP1LP55160 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCKAP1LP55160 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.86■□□□□ 0.93
NCKAP1LP55160 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCKAP1LP55160 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.86■□□□□ 0.93
NCKAP1LP55160 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
NCKAP1LP55160 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms