Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 CR769767.2-201ENST00000622735 460 ntBASIC19.93■□□□□ 0.78
EPHB3P54753 AP000550.4-202ENST00000639755 178 ntBASIC19.93■□□□□ 0.78
EPHB3P54753 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
EPHB3P54753 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHB3P54753 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
EPHB3P54753 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHB3P54753 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.92■□□□□ 0.78
EPHB3P54753 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.92■□□□□ 0.78
EPHB3P54753 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
EPHB3P54753 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
EPHB3P54753 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
EPHB3P54753 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
EPHB3P54753 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.92■□□□□ 0.78
EPHB3P54753 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EPHB3P54753 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.92■□□□□ 0.78
EPHB3P54753 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.92■□□□□ 0.78
EPHB3P54753 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.92■□□□□ 0.78
EPHB3P54753 GCSHP2-201ENST00000560971 527 ntBASIC19.92■□□□□ 0.78
EPHB3P54753 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.92■□□□□ 0.78
EPHB3P54753 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.92■□□□□ 0.78
EPHB3P54753 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.92■□□□□ 0.78
EPHB3P54753 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EPHB3P54753 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EPHB3P54753 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
EPHB3P54753 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
EPHB3P54753 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
EPHB3P54753 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.92■□□□□ 0.78
EPHB3P54753 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
EPHB3P54753 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
EPHB3P54753 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.92■□□□□ 0.78
EPHB3P54753 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EPHB3P54753 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
EPHB3P54753 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EPHB3P54753 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
EPHB3P54753 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.92■□□□□ 0.78
EPHB3P54753 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EPHB3P54753 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.91■□□□□ 0.78
EPHB3P54753 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB3P54753 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.91■□□□□ 0.78
EPHB3P54753 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB3P54753 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB3P54753 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB3P54753 PCED1CP-201ENST00000419887 785 ntBASIC19.91■□□□□ 0.78
EPHB3P54753 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB3P54753 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB3P54753 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB3P54753 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
EPHB3P54753 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB3P54753 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.91■□□□□ 0.78
EPHB3P54753 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB3P54753 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB3P54753 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB3P54753 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB3P54753 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.91■□□□□ 0.78
EPHB3P54753 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB3P54753 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB3P54753 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB3P54753 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB3P54753 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
EPHB3P54753 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EPHB3P54753 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EPHB3P54753 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EPHB3P54753 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.9■□□□□ 0.78
EPHB3P54753 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
EPHB3P54753 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EPHB3P54753 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
EPHB3P54753 STARP1-201ENST00000397973 869 ntBASIC19.9■□□□□ 0.78
EPHB3P54753 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
EPHB3P54753 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
EPHB3P54753 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.9■□□□□ 0.78
EPHB3P54753 KRT18P38-201ENST00000449496 1282 ntBASIC19.9■□□□□ 0.78
EPHB3P54753 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
EPHB3P54753 FAM86EP-206ENST00000510506 987 ntBASIC19.9■□□□□ 0.78
EPHB3P54753 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.9■□□□□ 0.78
EPHB3P54753 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
EPHB3P54753 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.9■□□□□ 0.78
EPHB3P54753 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.9■□□□□ 0.78
EPHB3P54753 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EPHB3P54753 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.9■□□□□ 0.78
EPHB3P54753 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
EPHB3P54753 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.9■□□□□ 0.78
EPHB3P54753 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.9■□□□□ 0.78
EPHB3P54753 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
EPHB3P54753 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.9■□□□□ 0.78
EPHB3P54753 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
EPHB3P54753 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.9■□□□□ 0.78
EPHB3P54753 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
EPHB3P54753 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
EPHB3P54753 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
EPHB3P54753 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.89■□□□□ 0.77
EPHB3P54753 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
EPHB3P54753 GPAT2P1-201ENST00000444924 1672 ntBASIC19.89■□□□□ 0.77
EPHB3P54753 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.89■□□□□ 0.77
EPHB3P54753 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
EPHB3P54753 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
EPHB3P54753 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.89■□□□□ 0.77
EPHB3P54753 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.89■□□□□ 0.77
EPHB3P54753 Z82202.1-201ENST00000623446 1880 ntBASIC19.89■□□□□ 0.77
EPHB3P54753 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.89■□□□□ 0.77
EPHB3P54753 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms