Protein–RNA interactions for Protein: P49279

SLC11A1, Natural resistance-associated macrophage protein 1, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC11A1P49279 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC11A1P49279 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SLC11A1P49279 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLC11A1P49279 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLC11A1P49279 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLC11A1P49279 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLC11A1P49279 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLC11A1P49279 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC11A1P49279 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC11A1P49279 HCG4P8-203ENST00000443049 980 ntBASIC20.28■□□□□ 0.84
SLC11A1P49279 RASA4DP-201ENST00000460726 1199 ntBASIC20.28■□□□□ 0.84
SLC11A1P49279 AC092597.1-201ENST00000487352 616 ntBASIC20.28■□□□□ 0.84
SLC11A1P49279 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC11A1P49279 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.28■□□□□ 0.84
SLC11A1P49279 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.28■□□□□ 0.84
SLC11A1P49279 KRT126P-201ENST00000549467 1181 ntBASIC20.28■□□□□ 0.84
SLC11A1P49279 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SLC11A1P49279 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.28■□□□□ 0.84
SLC11A1P49279 AC024243.1-201ENST00000609234 778 ntBASIC20.28■□□□□ 0.84
SLC11A1P49279 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.28■□□□□ 0.84
SLC11A1P49279 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLC11A1P49279 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC11A1P49279 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SLC11A1P49279 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
SLC11A1P49279 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC11A1P49279 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC11A1P49279 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLC11A1P49279 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC11A1P49279 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SLC11A1P49279 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.27■□□□□ 0.84
SLC11A1P49279 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.27■□□□□ 0.84
SLC11A1P49279 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC11A1P49279 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.27■□□□□ 0.84
SLC11A1P49279 HBZP1-201ENST00000354915 429 ntBASIC20.27■□□□□ 0.84
SLC11A1P49279 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLC11A1P49279 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SLC11A1P49279 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.27■□□□□ 0.84
SLC11A1P49279 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.27■□□□□ 0.84
SLC11A1P49279 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.27■□□□□ 0.84
SLC11A1P49279 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLC11A1P49279 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.27■□□□□ 0.84
SLC11A1P49279 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.27■□□□□ 0.84
SLC11A1P49279 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC11A1P49279 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC11A1P49279 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC11A1P49279 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.27■□□□□ 0.83
SLC11A1P49279 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
SLC11A1P49279 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC11A1P49279 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC11A1P49279 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC11A1P49279 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.26■□□□□ 0.83
SLC11A1P49279 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC11A1P49279 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC11A1P49279 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC11A1P49279 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC11A1P49279 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.26■□□□□ 0.83
SLC11A1P49279 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC11A1P49279 DUSP5P1-201ENST00000441325 1139 ntBASIC20.26■□□□□ 0.83
SLC11A1P49279 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.26■□□□□ 0.83
SLC11A1P49279 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC11A1P49279 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.26■□□□□ 0.83
SLC11A1P49279 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.26■□□□□ 0.83
SLC11A1P49279 AL121894.2-201ENST00000602977 491 ntBASIC20.26■□□□□ 0.83
SLC11A1P49279 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SLC11A1P49279 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SLC11A1P49279 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC11A1P49279 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC11A1P49279 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC11A1P49279 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC11A1P49279 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC11A1P49279 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC11A1P49279 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC11A1P49279 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC11A1P49279 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC11A1P49279 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC11A1P49279 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC11A1P49279 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC11A1P49279 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SLC11A1P49279 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.25■□□□□ 0.83
SLC11A1P49279 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC11A1P49279 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC11A1P49279 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC11A1P49279 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.25■□□□□ 0.83
SLC11A1P49279 MCCD1P1-208ENST00000445732 328 ntBASIC20.25■□□□□ 0.83
SLC11A1P49279 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.25■□□□□ 0.83
SLC11A1P49279 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.25■□□□□ 0.83
SLC11A1P49279 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.25■□□□□ 0.83
SLC11A1P49279 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.25■□□□□ 0.83
SLC11A1P49279 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC11A1P49279 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC11A1P49279 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.25■□□□□ 0.83
SLC11A1P49279 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC11A1P49279 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC11A1P49279 CLDN5-201ENST00000403084 2357 ntBASIC20.25■□□□□ 0.83
SLC11A1P49279 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC11A1P49279 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC11A1P49279 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC11A1P49279 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC11A1P49279 KRT8P3-201ENST00000519669 1449 ntBASIC20.25■□□□□ 0.83
SLC11A1P49279 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms