Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM4SF4P48230 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TM4SF4P48230 AL031284.1-201ENST00000419297 478 ntBASIC21.81■■□□□ 1.08
TM4SF4P48230 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC21.81■■□□□ 1.08
TM4SF4P48230 FAM197Y8-203ENST00000450145 560 ntBASIC21.81■■□□□ 1.08
TM4SF4P48230 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.81■■□□□ 1.08
TM4SF4P48230 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC21.81■■□□□ 1.08
TM4SF4P48230 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.81■■□□□ 1.08
TM4SF4P48230 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.81■■□□□ 1.08
TM4SF4P48230 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.81■■□□□ 1.08
TM4SF4P48230 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.81■■□□□ 1.08
TM4SF4P48230 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.81■■□□□ 1.08
TM4SF4P48230 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
TM4SF4P48230 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.81■■□□□ 1.08
TM4SF4P48230 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
TM4SF4P48230 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TM4SF4P48230 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TM4SF4P48230 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TM4SF4P48230 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TM4SF4P48230 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
TM4SF4P48230 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TM4SF4P48230 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC21.8■■□□□ 1.08
TM4SF4P48230 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC21.8■■□□□ 1.08
TM4SF4P48230 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC21.8■■□□□ 1.08
TM4SF4P48230 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC21.8■■□□□ 1.08
TM4SF4P48230 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.8■■□□□ 1.08
TM4SF4P48230 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC21.8■■□□□ 1.08
TM4SF4P48230 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.8■■□□□ 1.08
TM4SF4P48230 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TM4SF4P48230 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TM4SF4P48230 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.8■■□□□ 1.08
TM4SF4P48230 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TM4SF4P48230 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TM4SF4P48230 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
TM4SF4P48230 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TM4SF4P48230 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TM4SF4P48230 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TM4SF4P48230 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TM4SF4P48230 FABP5-202ENST00000396359 986 ntTSL 5 BASIC21.79■■□□□ 1.08
TM4SF4P48230 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC21.79■■□□□ 1.08
TM4SF4P48230 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TM4SF4P48230 POLD2P1-201ENST00000511220 997 ntBASIC21.79■■□□□ 1.08
TM4SF4P48230 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.79■■□□□ 1.08
TM4SF4P48230 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TM4SF4P48230 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.79■■□□□ 1.08
TM4SF4P48230 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TM4SF4P48230 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
TM4SF4P48230 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TM4SF4P48230 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
TM4SF4P48230 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TM4SF4P48230 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
TM4SF4P48230 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TM4SF4P48230 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.78■■□□□ 1.08
TM4SF4P48230 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.78■■□□□ 1.08
TM4SF4P48230 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TM4SF4P48230 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TM4SF4P48230 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TM4SF4P48230 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.78■■□□□ 1.08
TM4SF4P48230 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TM4SF4P48230 MED22-202ENST00000371999 987 ntTSL 3 BASIC21.78■■□□□ 1.08
TM4SF4P48230 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.78■■□□□ 1.08
TM4SF4P48230 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
TM4SF4P48230 ABBA01031661.1-201ENST00000634362 1253 ntBASIC21.78■■□□□ 1.08
TM4SF4P48230 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
TM4SF4P48230 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.78■■□□□ 1.08
TM4SF4P48230 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TM4SF4P48230 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TM4SF4P48230 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
TM4SF4P48230 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TM4SF4P48230 NSUN5P1-202ENST00000421140 1535 ntBASIC21.77■■□□□ 1.08
TM4SF4P48230 NSUN5P2-203ENST00000457352 1529 ntBASIC21.77■■□□□ 1.08
TM4SF4P48230 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.77■■□□□ 1.08
TM4SF4P48230 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.77■■□□□ 1.08
TM4SF4P48230 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.77■■□□□ 1.08
TM4SF4P48230 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TM4SF4P48230 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC21.77■■□□□ 1.08
TM4SF4P48230 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TM4SF4P48230 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TM4SF4P48230 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TM4SF4P48230 RN7SL606P-201ENST00000472779 293 ntBASIC21.77■■□□□ 1.08
TM4SF4P48230 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.77■■□□□ 1.08
TM4SF4P48230 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC21.77■■□□□ 1.08
TM4SF4P48230 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC21.77■■□□□ 1.08
TM4SF4P48230 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC21.77■■□□□ 1.08
TM4SF4P48230 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TM4SF4P48230 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.77■■□□□ 1.08
TM4SF4P48230 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
TM4SF4P48230 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.77■■□□□ 1.08
TM4SF4P48230 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TM4SF4P48230 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.77■■□□□ 1.07
TM4SF4P48230 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TM4SF4P48230 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
TM4SF4P48230 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.76■■□□□ 1.07
TM4SF4P48230 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TM4SF4P48230 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TM4SF4P48230 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TM4SF4P48230 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
TM4SF4P48230 BX842568.4-201ENST00000421222 227 ntBASIC21.76■■□□□ 1.07
TM4SF4P48230 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC21.76■■□□□ 1.07
TM4SF4P48230 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms