Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX5P45973 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX5P45973 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.41■□□□□ 0.22
CBX5P45973 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CBX5P45973 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.41■□□□□ 0.22
CBX5P45973 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX5P45973 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CBX5P45973 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.41■□□□□ 0.22
CBX5P45973 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.41■□□□□ 0.22
CBX5P45973 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.41■□□□□ 0.22
CBX5P45973 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX5P45973 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.41■□□□□ 0.22
CBX5P45973 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX5P45973 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.41■□□□□ 0.22
CBX5P45973 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CBX5P45973 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX5P45973 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.41■□□□□ 0.22
CBX5P45973 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX5P45973 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX5P45973 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.41■□□□□ 0.22
CBX5P45973 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CBX5P45973 Z98044.1-201ENST00000632503 1764 ntBASIC16.41■□□□□ 0.22
CBX5P45973 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX5P45973 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX5P45973 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX5P45973 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX5P45973 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX5P45973 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CBX5P45973 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX5P45973 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX5P45973 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.4■□□□□ 0.22
CBX5P45973 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX5P45973 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX5P45973 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX5P45973 AC093525.10-201ENST00000625130 1569 ntBASIC16.4■□□□□ 0.22
CBX5P45973 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX5P45973 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CBX5P45973 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
CBX5P45973 KRT18P11-201ENST00000435214 1283 ntBASIC16.4■□□□□ 0.22
CBX5P45973 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.4■□□□□ 0.22
CBX5P45973 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CBX5P45973 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CBX5P45973 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.4■□□□□ 0.22
CBX5P45973 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.4■□□□□ 0.22
CBX5P45973 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CBX5P45973 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.4■□□□□ 0.22
CBX5P45973 AC018553.1-201ENST00000616682 1458 ntBASIC16.4■□□□□ 0.22
CBX5P45973 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CBX5P45973 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
CBX5P45973 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CBX5P45973 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX5P45973 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.4■□□□□ 0.22
CBX5P45973 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CBX5P45973 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CBX5P45973 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.22
CBX5P45973 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
CBX5P45973 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.39■□□□□ 0.22
CBX5P45973 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX5P45973 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX5P45973 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX5P45973 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX5P45973 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX5P45973 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX5P45973 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.39■□□□□ 0.21
CBX5P45973 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.39■□□□□ 0.21
CBX5P45973 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.39■□□□□ 0.21
CBX5P45973 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CBX5P45973 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.39■□□□□ 0.21
CBX5P45973 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CBX5P45973 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.39■□□□□ 0.21
CBX5P45973 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX5P45973 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX5P45973 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX5P45973 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CBX5P45973 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.39■□□□□ 0.21
CBX5P45973 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX5P45973 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX5P45973 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.39■□□□□ 0.21
CBX5P45973 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX5P45973 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX5P45973 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CBX5P45973 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CBX5P45973 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.39■□□□□ 0.21
CBX5P45973 AC090164.3-201ENST00000610780 2143 ntBASIC16.39■□□□□ 0.21
CBX5P45973 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CBX5P45973 AC116351.2-201ENST00000606540 1585 ntBASIC16.38■□□□□ 0.21
CBX5P45973 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX5P45973 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CBX5P45973 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX5P45973 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX5P45973 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.38■□□□□ 0.21
CBX5P45973 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX5P45973 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX5P45973 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.38■□□□□ 0.21
CBX5P45973 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CBX5P45973 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CBX5P45973 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.38■□□□□ 0.21
CBX5P45973 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.38■□□□□ 0.21
CBX5P45973 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX5P45973 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms