Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MTHFRP42898 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.95■□□□□ 0.78
MTHFRP42898 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MTHFRP42898 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.95■□□□□ 0.78
MTHFRP42898 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MTHFRP42898 RASA4DP-201ENST00000460726 1199 ntBASIC19.95■□□□□ 0.78
MTHFRP42898 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.95■□□□□ 0.78
MTHFRP42898 AL121672.3-201ENST00000608644 468 ntBASIC19.95■□□□□ 0.78
MTHFRP42898 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MTHFRP42898 CR769767.2-201ENST00000622735 460 ntBASIC19.95■□□□□ 0.78
MTHFRP42898 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
MTHFRP42898 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
MTHFRP42898 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
MTHFRP42898 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MTHFRP42898 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MTHFRP42898 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
MTHFRP42898 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
MTHFRP42898 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MTHFRP42898 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.95■□□□□ 0.78
MTHFRP42898 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.95■□□□□ 0.78
MTHFRP42898 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.95■□□□□ 0.78
MTHFRP42898 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
MTHFRP42898 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.94■□□□□ 0.78
MTHFRP42898 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MTHFRP42898 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.94■□□□□ 0.78
MTHFRP42898 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MTHFRP42898 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MTHFRP42898 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
MTHFRP42898 FAAHP1-202ENST00000446499 1238 ntBASIC19.94■□□□□ 0.78
MTHFRP42898 TSSC2-201ENST00000450217 709 ntBASIC19.94■□□□□ 0.78
MTHFRP42898 BX276092.5-203ENST00000456199 560 ntBASIC19.94■□□□□ 0.78
MTHFRP42898 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.94■□□□□ 0.78
MTHFRP42898 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
MTHFRP42898 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.94■□□□□ 0.78
MTHFRP42898 MIR4674-201ENST00000582457 87 ntBASIC19.94■□□□□ 0.78
MTHFRP42898 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
MTHFRP42898 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
MTHFRP42898 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MTHFRP42898 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
MTHFRP42898 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MTHFRP42898 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
MTHFRP42898 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MTHFRP42898 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MTHFRP42898 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MTHFRP42898 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MTHFRP42898 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
MTHFRP42898 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
MTHFRP42898 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MTHFRP42898 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.93■□□□□ 0.78
MTHFRP42898 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
MTHFRP42898 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MTHFRP42898 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MTHFRP42898 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.93■□□□□ 0.78
MTHFRP42898 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MTHFRP42898 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.93■□□□□ 0.78
MTHFRP42898 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.93■□□□□ 0.78
MTHFRP42898 FDX1P1-201ENST00000449115 551 ntBASIC19.93■□□□□ 0.78
MTHFRP42898 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
MTHFRP42898 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.93■□□□□ 0.78
MTHFRP42898 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MTHFRP42898 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.93■□□□□ 0.78
MTHFRP42898 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
MTHFRP42898 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.92■□□□□ 0.78
MTHFRP42898 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
MTHFRP42898 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
MTHFRP42898 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MTHFRP42898 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
MTHFRP42898 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MTHFRP42898 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.92■□□□□ 0.78
MTHFRP42898 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MTHFRP42898 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.92■□□□□ 0.78
MTHFRP42898 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MTHFRP42898 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.92■□□□□ 0.78
MTHFRP42898 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MTHFRP42898 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MTHFRP42898 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
MTHFRP42898 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.92■□□□□ 0.78
MTHFRP42898 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
MTHFRP42898 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
MTHFRP42898 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MTHFRP42898 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MTHFRP42898 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MTHFRP42898 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.91■□□□□ 0.78
MTHFRP42898 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.91■□□□□ 0.78
MTHFRP42898 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MTHFRP42898 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MTHFRP42898 AL845331.1-201ENST00000424978 1190 ntBASIC19.91■□□□□ 0.78
MTHFRP42898 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.91■□□□□ 0.78
MTHFRP42898 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.91■□□□□ 0.78
MTHFRP42898 AC092597.1-201ENST00000487352 616 ntBASIC19.91■□□□□ 0.78
MTHFRP42898 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.91■□□□□ 0.78
MTHFRP42898 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.91■□□□□ 0.78
MTHFRP42898 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.91■□□□□ 0.78
MTHFRP42898 AC011498.5-201ENST00000592027 486 ntBASIC19.91■□□□□ 0.78
MTHFRP42898 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MTHFRP42898 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.91■□□□□ 0.78
MTHFRP42898 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MTHFRP42898 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MTHFRP42898 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MTHFRP42898 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms