Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.48■■□□□ 1.03
HTTP42858 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HTTP42858 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC21.48■■□□□ 1.03
HTTP42858 AC106730.1-201ENST00000566722 1090 ntBASIC21.48■■□□□ 1.03
HTTP42858 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.48■■□□□ 1.03
HTTP42858 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.48■■□□□ 1.03
HTTP42858 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC21.48■■□□□ 1.03
HTTP42858 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HTTP42858 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
HTTP42858 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HTTP42858 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
HTTP42858 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
HTTP42858 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC21.48■■□□□ 1.03
HTTP42858 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC21.48■■□□□ 1.03
HTTP42858 PIN1-206ENST00000587625 878 ntTSL 2 BASIC21.48■■□□□ 1.03
HTTP42858 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HTTP42858 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HTTP42858 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HTTP42858 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HTTP42858 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.48■■□□□ 1.03
HTTP42858 AC006128.1-201ENST00000624704 1661 ntBASIC21.48■■□□□ 1.03
HTTP42858 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
HTTP42858 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HTTP42858 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HTTP42858 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21.47■■□□□ 1.03
HTTP42858 FABP5-202ENST00000396359 986 ntTSL 5 BASIC21.47■■□□□ 1.03
HTTP42858 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
HTTP42858 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.47■■□□□ 1.03
HTTP42858 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HTTP42858 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.47■■□□□ 1.03
HTTP42858 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC21.47■■□□□ 1.03
HTTP42858 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HTTP42858 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC21.46■■□□□ 1.03
HTTP42858 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HTTP42858 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC21.46■■□□□ 1.03
HTTP42858 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HTTP42858 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.46■■□□□ 1.03
HTTP42858 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
HTTP42858 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HTTP42858 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HTTP42858 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.46■■□□□ 1.03
HTTP42858 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HTTP42858 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HTTP42858 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HTTP42858 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.46■■□□□ 1.03
HTTP42858 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HTTP42858 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
HTTP42858 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HTTP42858 MIR564-202ENST00000385049 94 ntBASIC21.46■■□□□ 1.03
HTTP42858 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
HTTP42858 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HTTP42858 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.46■■□□□ 1.03
HTTP42858 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
HTTP42858 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HTTP42858 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HTTP42858 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
HTTP42858 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
HTTP42858 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.46■■□□□ 1.03
HTTP42858 AC018712.1-201ENST00000455767 687 ntBASIC21.46■■□□□ 1.03
HTTP42858 MOK-208ENST00000519058 917 ntTSL 2 BASIC21.46■■□□□ 1.03
HTTP42858 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.46■■□□□ 1.03
HTTP42858 AC074051.2-201ENST00000565115 352 ntBASIC21.46■■□□□ 1.03
HTTP42858 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HTTP42858 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.03
HTTP42858 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HTTP42858 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.45■■□□□ 1.02
HTTP42858 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.45■■□□□ 1.02
HTTP42858 GGCT-205ENST00000409436 954 ntTSL 3 BASIC21.45■■□□□ 1.02
HTTP42858 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC21.45■■□□□ 1.02
HTTP42858 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
HTTP42858 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC21.45■■□□□ 1.02
HTTP42858 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.45■■□□□ 1.02
HTTP42858 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.45■■□□□ 1.02
HTTP42858 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
HTTP42858 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
HTTP42858 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HTTP42858 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HTTP42858 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HTTP42858 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
HTTP42858 AC005104.2-201ENST00000427818 678 ntBASIC21.45■■□□□ 1.02
HTTP42858 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.45■■□□□ 1.02
HTTP42858 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.45■■□□□ 1.02
HTTP42858 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
HTTP42858 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
HTTP42858 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HTTP42858 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
HTTP42858 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HTTP42858 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
HTTP42858 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
HTTP42858 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.44■■□□□ 1.02
HTTP42858 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
HTTP42858 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
HTTP42858 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HTTP42858 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HTTP42858 IGHV3-47-201ENST00000425060 335 ntBASIC21.44■■□□□ 1.02
HTTP42858 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.44■■□□□ 1.02
HTTP42858 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HTTP42858 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HTTP42858 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HTTP42858 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms