Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FDFT1P37268 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FDFT1P37268 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FDFT1P37268 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FDFT1P37268 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.46■□□□□ 0.71
FDFT1P37268 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.46■□□□□ 0.71
FDFT1P37268 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FDFT1P37268 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FDFT1P37268 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.45■□□□□ 0.7
FDFT1P37268 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FDFT1P37268 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.45■□□□□ 0.7
FDFT1P37268 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
FDFT1P37268 AL031598.1-201ENST00000561511 1773 ntBASIC19.45■□□□□ 0.7
FDFT1P37268 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.45■□□□□ 0.7
FDFT1P37268 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
FDFT1P37268 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FDFT1P37268 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
FDFT1P37268 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FDFT1P37268 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.45■□□□□ 0.7
FDFT1P37268 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
FDFT1P37268 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.45■□□□□ 0.7
FDFT1P37268 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FDFT1P37268 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.45■□□□□ 0.7
FDFT1P37268 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.45■□□□□ 0.7
FDFT1P37268 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.45■□□□□ 0.7
FDFT1P37268 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
FDFT1P37268 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FDFT1P37268 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.45■□□□□ 0.7
FDFT1P37268 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
FDFT1P37268 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
FDFT1P37268 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.45■□□□□ 0.7
FDFT1P37268 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FDFT1P37268 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FDFT1P37268 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FDFT1P37268 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FDFT1P37268 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.45■□□□□ 0.7
FDFT1P37268 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FDFT1P37268 Z98044.1-201ENST00000632503 1764 ntBASIC19.44■□□□□ 0.7
FDFT1P37268 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.44■□□□□ 0.7
FDFT1P37268 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
FDFT1P37268 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FDFT1P37268 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FDFT1P37268 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.44■□□□□ 0.7
FDFT1P37268 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FDFT1P37268 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FDFT1P37268 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
FDFT1P37268 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FDFT1P37268 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.44■□□□□ 0.7
FDFT1P37268 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FDFT1P37268 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
FDFT1P37268 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FDFT1P37268 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FDFT1P37268 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
FDFT1P37268 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
FDFT1P37268 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.44■□□□□ 0.7
FDFT1P37268 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.44■□□□□ 0.7
FDFT1P37268 TSPY23P-201ENST00000440136 739 ntBASIC19.44■□□□□ 0.7
FDFT1P37268 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
FDFT1P37268 AC133681.1-201ENST00000465482 601 ntBASIC19.44■□□□□ 0.7
FDFT1P37268 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.44■□□□□ 0.7
FDFT1P37268 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.44■□□□□ 0.7
FDFT1P37268 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.44■□□□□ 0.7
FDFT1P37268 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
FDFT1P37268 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
FDFT1P37268 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FDFT1P37268 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FDFT1P37268 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.44■□□□□ 0.7
FDFT1P37268 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
FDFT1P37268 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.44■□□□□ 0.7
FDFT1P37268 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.44■□□□□ 0.7
FDFT1P37268 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
FDFT1P37268 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
FDFT1P37268 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.43■□□□□ 0.7
FDFT1P37268 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FDFT1P37268 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FDFT1P37268 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FDFT1P37268 LETM1P2-201ENST00000597330 2178 ntBASIC19.43■□□□□ 0.7
FDFT1P37268 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
FDFT1P37268 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FDFT1P37268 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.43■□□□□ 0.7
FDFT1P37268 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FDFT1P37268 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
FDFT1P37268 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FDFT1P37268 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.43■□□□□ 0.7
FDFT1P37268 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.43■□□□□ 0.7
FDFT1P37268 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.43■□□□□ 0.7
FDFT1P37268 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
FDFT1P37268 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
FDFT1P37268 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FDFT1P37268 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
FDFT1P37268 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FDFT1P37268 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
FDFT1P37268 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FDFT1P37268 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
FDFT1P37268 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.42■□□□□ 0.7
FDFT1P37268 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FDFT1P37268 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FDFT1P37268 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FDFT1P37268 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FDFT1P37268 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms