Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HTR1EP28566 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HTR1EP28566 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HTR1EP28566 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HTR1EP28566 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HTR1EP28566 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HTR1EP28566 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HTR1EP28566 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.27■□□□□ 0.52
HTR1EP28566 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HTR1EP28566 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.27■□□□□ 0.52
HTR1EP28566 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.27■□□□□ 0.52
HTR1EP28566 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
HTR1EP28566 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HTR1EP28566 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HTR1EP28566 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HTR1EP28566 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HTR1EP28566 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HTR1EP28566 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HTR1EP28566 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HTR1EP28566 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.27■□□□□ 0.52
HTR1EP28566 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.27■□□□□ 0.52
HTR1EP28566 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.27■□□□□ 0.52
HTR1EP28566 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.27■□□□□ 0.52
HTR1EP28566 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.27■□□□□ 0.52
HTR1EP28566 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HTR1EP28566 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.27■□□□□ 0.52
HTR1EP28566 AC233263.1-201ENST00000578059 224 ntBASIC18.27■□□□□ 0.52
HTR1EP28566 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.27■□□□□ 0.52
HTR1EP28566 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HTR1EP28566 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HTR1EP28566 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HTR1EP28566 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.27■□□□□ 0.51
HTR1EP28566 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.27■□□□□ 0.51
HTR1EP28566 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
HTR1EP28566 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HTR1EP28566 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1EP28566 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1EP28566 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HTR1EP28566 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1EP28566 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1EP28566 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
HTR1EP28566 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1EP28566 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.26■□□□□ 0.51
HTR1EP28566 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1EP28566 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1EP28566 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.26■□□□□ 0.51
HTR1EP28566 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1EP28566 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
HTR1EP28566 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1EP28566 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1EP28566 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.26■□□□□ 0.51
HTR1EP28566 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.26■□□□□ 0.51
HTR1EP28566 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
HTR1EP28566 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1EP28566 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HTR1EP28566 SOX15-203ENST00000570788 1093 ntBASIC18.26■□□□□ 0.51
HTR1EP28566 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.26■□□□□ 0.51
HTR1EP28566 AC069544.1-201ENST00000609399 999 ntBASIC18.26■□□□□ 0.51
HTR1EP28566 FP475955.4-201ENST00000623131 1990 ntBASIC18.26■□□□□ 0.51
HTR1EP28566 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1EP28566 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1EP28566 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1EP28566 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.25■□□□□ 0.51
HTR1EP28566 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1EP28566 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1EP28566 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1EP28566 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1EP28566 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
HTR1EP28566 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.25■□□□□ 0.51
HTR1EP28566 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1EP28566 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.25■□□□□ 0.51
HTR1EP28566 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1EP28566 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.25■□□□□ 0.51
HTR1EP28566 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1EP28566 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1EP28566 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HTR1EP28566 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1EP28566 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.25■□□□□ 0.51
HTR1EP28566 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1EP28566 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1EP28566 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.25■□□□□ 0.51
HTR1EP28566 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.25■□□□□ 0.51
HTR1EP28566 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.25■□□□□ 0.51
HTR1EP28566 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1EP28566 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1EP28566 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HTR1EP28566 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1EP28566 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.25■□□□□ 0.51
HTR1EP28566 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1EP28566 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
HTR1EP28566 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HTR1EP28566 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
HTR1EP28566 BICD1-207ENST00000551848 1962 ntBASIC18.24■□□□□ 0.51
HTR1EP28566 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.24■□□□□ 0.51
HTR1EP28566 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HTR1EP28566 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HTR1EP28566 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HTR1EP28566 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
HTR1EP28566 BX088651.1-201ENST00000540551 451 ntBASIC18.24■□□□□ 0.51
HTR1EP28566 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms