Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
GDF1P27539 AL158211.5-201ENST00000623583 2518 ntBASIC17.31■□□□□ 0.36
GDF1P27539 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
GDF1P27539 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.31■□□□□ 0.36
GDF1P27539 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDF1P27539 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.31■□□□□ 0.36
GDF1P27539 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDF1P27539 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GDF1P27539 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDF1P27539 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GDF1P27539 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GDF1P27539 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDF1P27539 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDF1P27539 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDF1P27539 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.31■□□□□ 0.36
GDF1P27539 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDF1P27539 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.31■□□□□ 0.36
GDF1P27539 HMGA1P5-201ENST00000412453 271 ntBASIC17.31■□□□□ 0.36
GDF1P27539 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDF1P27539 FAM87A-204ENST00000613235 858 ntBASIC17.31■□□□□ 0.36
GDF1P27539 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDF1P27539 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDF1P27539 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GDF1P27539 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
GDF1P27539 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDF1P27539 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDF1P27539 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDF1P27539 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.31■□□□□ 0.36
GDF1P27539 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDF1P27539 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDF1P27539 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDF1P27539 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
GDF1P27539 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
GDF1P27539 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDF1P27539 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDF1P27539 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDF1P27539 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GDF1P27539 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDF1P27539 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDF1P27539 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDF1P27539 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GDF1P27539 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
GDF1P27539 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDF1P27539 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDF1P27539 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.3■□□□□ 0.36
GDF1P27539 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.3■□□□□ 0.36
GDF1P27539 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDF1P27539 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
GDF1P27539 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.3■□□□□ 0.36
GDF1P27539 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
GDF1P27539 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.3■□□□□ 0.36
GDF1P27539 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.3■□□□□ 0.36
GDF1P27539 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDF1P27539 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDF1P27539 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.3■□□□□ 0.36
GDF1P27539 MIR1224-201ENST00000408193 85 ntBASIC17.3■□□□□ 0.36
GDF1P27539 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GDF1P27539 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.3■□□□□ 0.36
GDF1P27539 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
GDF1P27539 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.3■□□□□ 0.36
GDF1P27539 AC007663.1-201ENST00000438948 1240 ntBASIC17.3■□□□□ 0.36
GDF1P27539 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.3■□□□□ 0.36
GDF1P27539 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
GDF1P27539 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.3■□□□□ 0.36
GDF1P27539 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
GDF1P27539 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDF1P27539 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
GDF1P27539 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GDF1P27539 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDF1P27539 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GDF1P27539 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDF1P27539 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDF1P27539 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDF1P27539 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GDF1P27539 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.3■□□□□ 0.36
GDF1P27539 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GDF1P27539 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GDF1P27539 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.29■□□□□ 0.36
GDF1P27539 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GDF1P27539 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GDF1P27539 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GDF1P27539 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
GDF1P27539 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.29■□□□□ 0.36
GDF1P27539 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GDF1P27539 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GDF1P27539 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.29■□□□□ 0.36
GDF1P27539 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.29■□□□□ 0.36
GDF1P27539 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.29■□□□□ 0.36
GDF1P27539 AC010203.1-204ENST00000548782 407 ntBASIC17.29■□□□□ 0.36
GDF1P27539 AL353719.1-201ENST00000566847 864 ntBASIC17.29■□□□□ 0.36
GDF1P27539 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.29■□□□□ 0.36
GDF1P27539 AC010653.2-201ENST00000623505 997 ntBASIC17.29■□□□□ 0.36
GDF1P27539 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
GDF1P27539 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GDF1P27539 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
GDF1P27539 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GDF1P27539 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.29■□□□□ 0.36
GDF1P27539 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GDF1P27539 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GDF1P27539 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms