Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.26■□□□□ 0.67
XPAP23025 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.26■□□□□ 0.67
XPAP23025 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
XPAP23025 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
XPAP23025 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
XPAP23025 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
XPAP23025 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
XPAP23025 AC125437.2-201ENST00000625180 2167 ntBASIC19.26■□□□□ 0.67
XPAP23025 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
XPAP23025 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
XPAP23025 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.25■□□□□ 0.67
XPAP23025 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.25■□□□□ 0.67
XPAP23025 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
XPAP23025 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
XPAP23025 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.25■□□□□ 0.67
XPAP23025 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
XPAP23025 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
XPAP23025 SDHAP1-207ENST00000440850 2000 ntBASIC19.25■□□□□ 0.67
XPAP23025 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
XPAP23025 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
XPAP23025 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
XPAP23025 CYP2D8P-201ENST00000433633 1490 ntBASIC19.25■□□□□ 0.67
XPAP23025 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
XPAP23025 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.25■□□□□ 0.67
XPAP23025 AC128688.1-201ENST00000487626 519 ntBASIC19.25■□□□□ 0.67
XPAP23025 PRSS44-201ENST00000515154 1146 ntBASIC19.25■□□□□ 0.67
XPAP23025 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.25■□□□□ 0.67
XPAP23025 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
XPAP23025 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.25■□□□□ 0.67
XPAP23025 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.25■□□□□ 0.67
XPAP23025 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
XPAP23025 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
XPAP23025 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
XPAP23025 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
XPAP23025 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
XPAP23025 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
XPAP23025 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
XPAP23025 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
XPAP23025 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.25■□□□□ 0.67
XPAP23025 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
XPAP23025 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
XPAP23025 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
XPAP23025 KRT18P22-201ENST00000402024 1347 ntBASIC19.25■□□□□ 0.67
XPAP23025 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
XPAP23025 AFG3L1P-217ENST00000557444 2447 ntBASIC19.24■□□□□ 0.67
XPAP23025 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
XPAP23025 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
XPAP23025 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
XPAP23025 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
XPAP23025 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
XPAP23025 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.24■□□□□ 0.67
XPAP23025 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
XPAP23025 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
XPAP23025 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
XPAP23025 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
XPAP23025 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
XPAP23025 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.24■□□□□ 0.67
XPAP23025 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.24■□□□□ 0.67
XPAP23025 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
XPAP23025 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.24■□□□□ 0.67
XPAP23025 AC010947.1-201ENST00000623454 693 ntBASIC19.24■□□□□ 0.67
XPAP23025 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
XPAP23025 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
XPAP23025 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.24■□□□□ 0.67
XPAP23025 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.24■□□□□ 0.67
XPAP23025 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
XPAP23025 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.24■□□□□ 0.67
XPAP23025 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
XPAP23025 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
XPAP23025 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
XPAP23025 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
XPAP23025 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.24■□□□□ 0.67
XPAP23025 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
XPAP23025 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
XPAP23025 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
XPAP23025 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
XPAP23025 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
XPAP23025 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
XPAP23025 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.23■□□□□ 0.67
XPAP23025 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
XPAP23025 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
XPAP23025 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.23■□□□□ 0.67
XPAP23025 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
XPAP23025 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
XPAP23025 Z82202.1-201ENST00000623446 1880 ntBASIC19.23■□□□□ 0.67
XPAP23025 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
XPAP23025 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.23■□□□□ 0.67
XPAP23025 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
XPAP23025 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.23■□□□□ 0.67
XPAP23025 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.23■□□□□ 0.67
XPAP23025 CCR12P-201ENST00000446203 998 ntBASIC19.23■□□□□ 0.67
XPAP23025 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.23■□□□□ 0.67
XPAP23025 CKBP1-201ENST00000565489 1086 ntBASIC19.23■□□□□ 0.67
XPAP23025 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
XPAP23025 AC145285.6-201ENST00000604632 637 ntBASIC19.23■□□□□ 0.67
XPAP23025 AC097493.4-201ENST00000641197 219 ntBASIC19.23■□□□□ 0.67
XPAP23025 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
XPAP23025 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
XPAP23025 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
XPAP23025 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms