Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
ERCC2P18074 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
ERCC2P18074 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ERCC2P18074 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.64■□□□□ 0.74
ERCC2P18074 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC2P18074 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC2P18074 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC2P18074 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC2P18074 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
ERCC2P18074 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.64■□□□□ 0.73
ERCC2P18074 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.64■□□□□ 0.73
ERCC2P18074 TSPY7P-201ENST00000431358 1114 ntBASIC19.64■□□□□ 0.73
ERCC2P18074 AL355355.2-201ENST00000442321 338 ntBASIC19.64■□□□□ 0.73
ERCC2P18074 FAM207BP-201ENST00000447172 505 ntBASIC19.64■□□□□ 0.73
ERCC2P18074 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC2P18074 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.64■□□□□ 0.73
ERCC2P18074 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC2P18074 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.64■□□□□ 0.73
ERCC2P18074 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC2P18074 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.64■□□□□ 0.73
ERCC2P18074 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.64■□□□□ 0.73
ERCC2P18074 AC026471.5-201ENST00000615068 467 ntBASIC19.64■□□□□ 0.73
ERCC2P18074 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.64■□□□□ 0.73
ERCC2P18074 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC2P18074 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.64■□□□□ 0.73
ERCC2P18074 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC2P18074 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC2P18074 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC2P18074 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
ERCC2P18074 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC2P18074 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
ERCC2P18074 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC2P18074 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC2P18074 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC2P18074 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC2P18074 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC2P18074 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.64■□□□□ 0.73
ERCC2P18074 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC2P18074 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC2P18074 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC2P18074 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC2P18074 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC2P18074 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.63■□□□□ 0.73
ERCC2P18074 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC2P18074 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC2P18074 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
ERCC2P18074 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ERCC2P18074 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC2P18074 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC2P18074 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC2P18074 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
ERCC2P18074 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC2P18074 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
ERCC2P18074 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.63■□□□□ 0.73
ERCC2P18074 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
ERCC2P18074 PRSS44-201ENST00000515154 1146 ntBASIC19.63■□□□□ 0.73
ERCC2P18074 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.63■□□□□ 0.73
ERCC2P18074 REXO1L10P-201ENST00000615707 1290 ntBASIC19.63■□□□□ 0.73
ERCC2P18074 REXO1L12P-201ENST00000622156 912 ntBASIC19.63■□□□□ 0.73
ERCC2P18074 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC2P18074 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC2P18074 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC2P18074 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC2P18074 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC2P18074 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC2P18074 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
ERCC2P18074 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC2P18074 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ERCC2P18074 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC2P18074 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC2P18074 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ERCC2P18074 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC2P18074 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC2P18074 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.62■□□□□ 0.73
ERCC2P18074 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC2P18074 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ERCC2P18074 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
ERCC2P18074 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.62■□□□□ 0.73
ERCC2P18074 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.62■□□□□ 0.73
ERCC2P18074 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.62■□□□□ 0.73
ERCC2P18074 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.62■□□□□ 0.73
ERCC2P18074 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.62■□□□□ 0.73
ERCC2P18074 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.62■□□□□ 0.73
ERCC2P18074 AP000692.2-201ENST00000608391 879 ntBASIC19.62■□□□□ 0.73
ERCC2P18074 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.62■□□□□ 0.73
ERCC2P18074 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.62■□□□□ 0.73
ERCC2P18074 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.62■□□□□ 0.73
ERCC2P18074 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC2P18074 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.62■□□□□ 0.73
ERCC2P18074 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ERCC2P18074 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC2P18074 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.62■□□□□ 0.73
ERCC2P18074 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC2P18074 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
ERCC2P18074 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERCC2P18074 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.61■□□□□ 0.73
ERCC2P18074 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERCC2P18074 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
ERCC2P18074 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERCC2P18074 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms