Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTPS1P17812 AC141586.3-201ENST00000562166 1838 ntBASIC19.18■□□□□ 0.66
CTPS1P17812 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTPS1P17812 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.18■□□□□ 0.66
CTPS1P17812 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTPS1P17812 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTPS1P17812 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTPS1P17812 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.18■□□□□ 0.66
CTPS1P17812 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CTPS1P17812 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.18■□□□□ 0.66
CTPS1P17812 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTPS1P17812 TSPY21P-201ENST00000433481 731 ntBASIC19.18■□□□□ 0.66
CTPS1P17812 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.18■□□□□ 0.66
CTPS1P17812 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTPS1P17812 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.18■□□□□ 0.66
CTPS1P17812 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.18■□□□□ 0.66
CTPS1P17812 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTPS1P17812 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTPS1P17812 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.18■□□□□ 0.66
CTPS1P17812 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTPS1P17812 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTPS1P17812 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTPS1P17812 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.18■□□□□ 0.66
CTPS1P17812 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTPS1P17812 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTPS1P17812 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.18■□□□□ 0.66
CTPS1P17812 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
CTPS1P17812 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTPS1P17812 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.17■□□□□ 0.66
CTPS1P17812 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTPS1P17812 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTPS1P17812 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTPS1P17812 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CTPS1P17812 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CTPS1P17812 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.17■□□□□ 0.66
CTPS1P17812 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTPS1P17812 MMP23A-201ENST00000234610 1017 ntBASIC19.17■□□□□ 0.66
CTPS1P17812 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTPS1P17812 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTPS1P17812 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTPS1P17812 FITM1-202ENST00000559294 800 ntBASIC19.17■□□□□ 0.66
CTPS1P17812 CKBP1-201ENST00000565489 1086 ntBASIC19.17■□□□□ 0.66
CTPS1P17812 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.17■□□□□ 0.66
CTPS1P17812 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CTPS1P17812 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTPS1P17812 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.17■□□□□ 0.66
CTPS1P17812 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.17■□□□□ 0.66
CTPS1P17812 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CTPS1P17812 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTPS1P17812 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTPS1P17812 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTPS1P17812 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTPS1P17812 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CTPS1P17812 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CTPS1P17812 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.16■□□□□ 0.66
CTPS1P17812 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.16■□□□□ 0.66
CTPS1P17812 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
CTPS1P17812 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTPS1P17812 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.16■□□□□ 0.66
CTPS1P17812 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
CTPS1P17812 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTPS1P17812 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTPS1P17812 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.16■□□□□ 0.66
CTPS1P17812 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTPS1P17812 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTPS1P17812 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTPS1P17812 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.16■□□□□ 0.66
CTPS1P17812 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTPS1P17812 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
CTPS1P17812 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTPS1P17812 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTPS1P17812 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.16■□□□□ 0.66
CTPS1P17812 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.16■□□□□ 0.66
CTPS1P17812 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTPS1P17812 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.16■□□□□ 0.66
CTPS1P17812 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
CTPS1P17812 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTPS1P17812 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTPS1P17812 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTPS1P17812 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTPS1P17812 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTPS1P17812 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.15■□□□□ 0.66
CTPS1P17812 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTPS1P17812 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTPS1P17812 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTPS1P17812 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CTPS1P17812 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTPS1P17812 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTPS1P17812 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.15■□□□□ 0.66
CTPS1P17812 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.15■□□□□ 0.66
CTPS1P17812 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.15■□□□□ 0.66
CTPS1P17812 AC087499.1-201ENST00000418141 1075 ntBASIC19.15■□□□□ 0.66
CTPS1P17812 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.15■□□□□ 0.66
CTPS1P17812 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.15■□□□□ 0.66
CTPS1P17812 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTPS1P17812 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTPS1P17812 IRX1P1-201ENST00000438849 1838 ntBASIC19.15■□□□□ 0.66
CTPS1P17812 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.15■□□□□ 0.66
CTPS1P17812 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTPS1P17812 AC096733.2-201ENST00000609937 1394 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms