Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 AC092119.3-201ENST00000612618 583 ntBASIC21.24■□□□□ 0.99
SMPD1P17405 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.24■□□□□ 0.99
SMPD1P17405 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.24■□□□□ 0.99
SMPD1P17405 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMPD1P17405 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMPD1P17405 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
SMPD1P17405 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMPD1P17405 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMPD1P17405 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.23■□□□□ 0.99
SMPD1P17405 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.23■□□□□ 0.99
SMPD1P17405 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMPD1P17405 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMPD1P17405 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMPD1P17405 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.23■□□□□ 0.99
SMPD1P17405 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMPD1P17405 AC026396.1-201ENST00000419388 421 ntBASIC21.23■□□□□ 0.99
SMPD1P17405 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.23■□□□□ 0.99
SMPD1P17405 MCCD1P1-208ENST00000445732 328 ntBASIC21.23■□□□□ 0.99
SMPD1P17405 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.23■□□□□ 0.99
SMPD1P17405 MIR3180-5-201ENST00000583743 153 ntBASIC21.23■□□□□ 0.99
SMPD1P17405 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SMPD1P17405 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMPD1P17405 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMPD1P17405 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
SMPD1P17405 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMPD1P17405 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.23■□□□□ 0.99
SMPD1P17405 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMPD1P17405 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SMPD1P17405 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMPD1P17405 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.23■□□□□ 0.99
SMPD1P17405 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SMPD1P17405 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMPD1P17405 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMPD1P17405 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.22■□□□□ 0.99
SMPD1P17405 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMPD1P17405 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMPD1P17405 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMPD1P17405 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMPD1P17405 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMPD1P17405 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.22■□□□□ 0.99
SMPD1P17405 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.22■□□□□ 0.99
SMPD1P17405 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.22■□□□□ 0.99
SMPD1P17405 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMPD1P17405 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMPD1P17405 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.22■□□□□ 0.99
SMPD1P17405 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.22■□□□□ 0.99
SMPD1P17405 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.22■□□□□ 0.99
SMPD1P17405 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.22■□□□□ 0.99
SMPD1P17405 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.22■□□□□ 0.99
SMPD1P17405 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SMPD1P17405 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.22■□□□□ 0.99
SMPD1P17405 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
SMPD1P17405 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMPD1P17405 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.22■□□□□ 0.99
SMPD1P17405 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SMPD1P17405 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.22■□□□□ 0.99
SMPD1P17405 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.21■□□□□ 0.99
SMPD1P17405 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.21■□□□□ 0.99
SMPD1P17405 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMPD1P17405 KRT8P3-201ENST00000519669 1449 ntBASIC21.21■□□□□ 0.99
SMPD1P17405 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.21■□□□□ 0.99
SMPD1P17405 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
SMPD1P17405 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMPD1P17405 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMPD1P17405 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMPD1P17405 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
SMPD1P17405 SEC1P-202ENST00000473944 940 ntBASIC21.21■□□□□ 0.99
SMPD1P17405 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.21■□□□□ 0.99
SMPD1P17405 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
SMPD1P17405 AC079602.3-201ENST00000623931 403 ntBASIC21.21■□□□□ 0.99
SMPD1P17405 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMPD1P17405 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMPD1P17405 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.21■□□□□ 0.99
SMPD1P17405 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.21■□□□□ 0.99
SMPD1P17405 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMPD1P17405 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMPD1P17405 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMPD1P17405 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SMPD1P17405 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.2■□□□□ 0.99
SMPD1P17405 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMPD1P17405 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SMPD1P17405 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMPD1P17405 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.2■□□□□ 0.98
SMPD1P17405 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
SMPD1P17405 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMPD1P17405 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
SMPD1P17405 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMPD1P17405 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.2■□□□□ 0.98
SMPD1P17405 AC011498.5-201ENST00000592027 486 ntBASIC21.2■□□□□ 0.98
SMPD1P17405 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMPD1P17405 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.2■□□□□ 0.98
SMPD1P17405 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMPD1P17405 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMPD1P17405 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMPD1P17405 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMPD1P17405 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMPD1P17405 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMPD1P17405 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMPD1P17405 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.19■□□□□ 0.98
SMPD1P17405 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms