Protein–RNA interactions for Protein: P16383

GCFC2, GC-rich sequence DNA-binding factor 2, humanhuman

Known RBP Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2P16383 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
GCFC2P16383 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.57■■□□□ 1.04
GCFC2P16383 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.57■■□□□ 1.04
GCFC2P16383 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
GCFC2P16383 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
GCFC2P16383 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.57■■□□□ 1.04
GCFC2P16383 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.57■■□□□ 1.04
GCFC2P16383 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GCFC2P16383 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.56■■□□□ 1.04
GCFC2P16383 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GCFC2P16383 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.56■■□□□ 1.04
GCFC2P16383 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.56■■□□□ 1.04
GCFC2P16383 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
GCFC2P16383 AL390955.1-201ENST00000428694 934 ntBASIC21.56■■□□□ 1.04
GCFC2P16383 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GCFC2P16383 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.56■■□□□ 1.04
GCFC2P16383 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.56■■□□□ 1.04
GCFC2P16383 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.56■■□□□ 1.04
GCFC2P16383 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.56■■□□□ 1.04
GCFC2P16383 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.56■■□□□ 1.04
GCFC2P16383 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.56■■□□□ 1.04
GCFC2P16383 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GCFC2P16383 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
GCFC2P16383 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
GCFC2P16383 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
GCFC2P16383 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
GCFC2P16383 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
GCFC2P16383 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
GCFC2P16383 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GCFC2P16383 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.56■■□□□ 1.04
GCFC2P16383 AL161938.1-201ENST00000569833 2180 ntBASIC21.55■■□□□ 1.04
GCFC2P16383 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.55■■□□□ 1.04
GCFC2P16383 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.55■■□□□ 1.04
GCFC2P16383 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GCFC2P16383 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
GCFC2P16383 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GCFC2P16383 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GCFC2P16383 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
GCFC2P16383 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.55■■□□□ 1.04
GCFC2P16383 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.55■■□□□ 1.04
GCFC2P16383 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GCFC2P16383 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.55■■□□□ 1.04
GCFC2P16383 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GCFC2P16383 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.55■■□□□ 1.04
GCFC2P16383 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.55■■□□□ 1.04
GCFC2P16383 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GCFC2P16383 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GCFC2P16383 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
GCFC2P16383 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.55■■□□□ 1.04
GCFC2P16383 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GCFC2P16383 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GCFC2P16383 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.55■■□□□ 1.04
GCFC2P16383 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
GCFC2P16383 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
GCFC2P16383 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
GCFC2P16383 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.55■■□□□ 1.04
GCFC2P16383 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GCFC2P16383 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GCFC2P16383 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GCFC2P16383 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.54■■□□□ 1.04
GCFC2P16383 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.54■■□□□ 1.04
GCFC2P16383 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
GCFC2P16383 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GCFC2P16383 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.54■■□□□ 1.04
GCFC2P16383 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.54■■□□□ 1.04
GCFC2P16383 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.54■■□□□ 1.04
GCFC2P16383 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.54■■□□□ 1.04
GCFC2P16383 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.54■■□□□ 1.04
GCFC2P16383 C2orf69P3-201ENST00000565542 1120 ntBASIC21.54■■□□□ 1.04
GCFC2P16383 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.54■■□□□ 1.04
GCFC2P16383 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.54■■□□□ 1.04
GCFC2P16383 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.54■■□□□ 1.04
GCFC2P16383 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GCFC2P16383 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GCFC2P16383 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
GCFC2P16383 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GCFC2P16383 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GCFC2P16383 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
GCFC2P16383 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GCFC2P16383 KRT8P3-201ENST00000519669 1449 ntBASIC21.54■■□□□ 1.04
GCFC2P16383 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GCFC2P16383 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
GCFC2P16383 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.53■■□□□ 1.04
GCFC2P16383 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
GCFC2P16383 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GCFC2P16383 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GCFC2P16383 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
GCFC2P16383 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
GCFC2P16383 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GCFC2P16383 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.53■■□□□ 1.04
GCFC2P16383 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
GCFC2P16383 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
GCFC2P16383 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
GCFC2P16383 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.53■■□□□ 1.04
GCFC2P16383 SLC25A1P2-201ENST00000430693 912 ntBASIC21.53■■□□□ 1.04
GCFC2P16383 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.53■■□□□ 1.04
GCFC2P16383 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.53■■□□□ 1.04
GCFC2P16383 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GCFC2P16383 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.53■■□□□ 1.04
GCFC2P16383 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms