Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SRFP11831 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SRFP11831 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SRFP11831 ZNF815P-204ENST00000434898 1737 ntBASIC19.33■□□□□ 0.68
SRFP11831 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SRFP11831 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SRFP11831 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SRFP11831 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SRFP11831 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SRFP11831 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.32■□□□□ 0.68
SRFP11831 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.32■□□□□ 0.68
SRFP11831 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.32■□□□□ 0.68
SRFP11831 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SRFP11831 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SRFP11831 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SRFP11831 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SRFP11831 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SRFP11831 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SRFP11831 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.32■□□□□ 0.68
SRFP11831 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.32■□□□□ 0.68
SRFP11831 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
SRFP11831 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.32■□□□□ 0.68
SRFP11831 AC104819.1-201ENST00000504587 486 ntBASIC19.32■□□□□ 0.68
SRFP11831 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.32■□□□□ 0.68
SRFP11831 AC079776.4-201ENST00000511039 504 ntBASIC19.32■□□□□ 0.68
SRFP11831 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.32■□□□□ 0.68
SRFP11831 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.32■□□□□ 0.68
SRFP11831 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SRFP11831 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.32■□□□□ 0.68
SRFP11831 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SRFP11831 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.32■□□□□ 0.68
SRFP11831 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.32■□□□□ 0.68
SRFP11831 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.32■□□□□ 0.68
SRFP11831 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SRFP11831 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SRFP11831 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SRFP11831 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.32■□□□□ 0.68
SRFP11831 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.32■□□□□ 0.68
SRFP11831 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SRFP11831 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRFP11831 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SRFP11831 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.31■□□□□ 0.68
SRFP11831 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SRFP11831 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRFP11831 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRFP11831 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SRFP11831 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SRFP11831 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRFP11831 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRFP11831 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SRFP11831 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SRFP11831 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.31■□□□□ 0.68
SRFP11831 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.31■□□□□ 0.68
SRFP11831 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.31■□□□□ 0.68
SRFP11831 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SRFP11831 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.31■□□□□ 0.68
SRFP11831 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SRFP11831 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRFP11831 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SRFP11831 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRFP11831 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.31■□□□□ 0.68
SRFP11831 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SRFP11831 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRFP11831 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SRFP11831 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRFP11831 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SRFP11831 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRFP11831 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.3■□□□□ 0.68
SRFP11831 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SRFP11831 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRFP11831 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SRFP11831 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRFP11831 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SRFP11831 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRFP11831 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.3■□□□□ 0.68
SRFP11831 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
SRFP11831 AC090616.6-201ENST00000582640 721 ntBASIC19.3■□□□□ 0.68
SRFP11831 AL121912.1-201ENST00000603683 238 ntBASIC19.3■□□□□ 0.68
SRFP11831 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SRFP11831 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SRFP11831 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.3■□□□□ 0.68
SRFP11831 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SRFP11831 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRFP11831 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRFP11831 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRFP11831 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.3■□□□□ 0.68
SRFP11831 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRFP11831 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRFP11831 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.29■□□□□ 0.68
SRFP11831 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SRFP11831 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.29■□□□□ 0.68
SRFP11831 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.29■□□□□ 0.68
SRFP11831 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
SRFP11831 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.29■□□□□ 0.68
SRFP11831 AC133561.1-201ENST00000568600 2415 ntBASIC19.29■□□□□ 0.68
SRFP11831 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRFP11831 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRFP11831 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.29■□□□□ 0.68
SRFP11831 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.29■□□□□ 0.68
SRFP11831 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms