Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHRNB1P11230 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CHRNB1P11230 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.69
CHRNB1P11230 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHRNB1P11230 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CHRNB1P11230 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.33■□□□□ 0.68
CHRNB1P11230 AC034232.1-201ENST00000506026 1064 ntBASIC19.33■□□□□ 0.68
CHRNB1P11230 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.33■□□□□ 0.68
CHRNB1P11230 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
CHRNB1P11230 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHRNB1P11230 AL691432.2-201ENST00000607222 2038 ntBASIC19.33■□□□□ 0.68
CHRNB1P11230 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CHRNB1P11230 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CHRNB1P11230 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHRNB1P11230 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.33■□□□□ 0.68
CHRNB1P11230 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHRNB1P11230 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.33■□□□□ 0.68
CHRNB1P11230 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHRNB1P11230 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHRNB1P11230 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CHRNB1P11230 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.32■□□□□ 0.68
CHRNB1P11230 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.32■□□□□ 0.68
CHRNB1P11230 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CHRNB1P11230 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHRNB1P11230 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHRNB1P11230 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CHRNB1P11230 FDX1P1-201ENST00000449115 551 ntBASIC19.32■□□□□ 0.68
CHRNB1P11230 TSSC2-201ENST00000450217 709 ntBASIC19.32■□□□□ 0.68
CHRNB1P11230 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHRNB1P11230 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.32■□□□□ 0.68
CHRNB1P11230 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.32■□□□□ 0.68
CHRNB1P11230 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
CHRNB1P11230 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
CHRNB1P11230 MIR3180-1-201ENST00000580374 94 ntBASIC19.32■□□□□ 0.68
CHRNB1P11230 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.32■□□□□ 0.68
CHRNB1P11230 MIR3180-3-201ENST00000584616 94 ntBASIC19.32■□□□□ 0.68
CHRNB1P11230 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.32■□□□□ 0.68
CHRNB1P11230 AC011498.5-201ENST00000592027 486 ntBASIC19.32■□□□□ 0.68
CHRNB1P11230 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHRNB1P11230 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.32■□□□□ 0.68
CHRNB1P11230 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.32■□□□□ 0.68
CHRNB1P11230 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHRNB1P11230 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.32■□□□□ 0.68
CHRNB1P11230 AC016734.2-201ENST00000624325 1377 ntBASIC19.32■□□□□ 0.68
CHRNB1P11230 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.31■□□□□ 0.68
CHRNB1P11230 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CHRNB1P11230 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.31■□□□□ 0.68
CHRNB1P11230 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNB1P11230 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CHRNB1P11230 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNB1P11230 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.31■□□□□ 0.68
CHRNB1P11230 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNB1P11230 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNB1P11230 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNB1P11230 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.31■□□□□ 0.68
CHRNB1P11230 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.31■□□□□ 0.68
CHRNB1P11230 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CHRNB1P11230 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.31■□□□□ 0.68
CHRNB1P11230 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.31■□□□□ 0.68
CHRNB1P11230 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.31■□□□□ 0.68
CHRNB1P11230 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNB1P11230 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNB1P11230 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.31■□□□□ 0.68
CHRNB1P11230 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNB1P11230 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.31■□□□□ 0.68
CHRNB1P11230 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.31■□□□□ 0.68
CHRNB1P11230 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNB1P11230 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.31■□□□□ 0.68
CHRNB1P11230 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.31■□□□□ 0.68
CHRNB1P11230 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNB1P11230 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNB1P11230 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNB1P11230 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CHRNB1P11230 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNB1P11230 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNB1P11230 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CHRNB1P11230 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CHRNB1P11230 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNB1P11230 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
CHRNB1P11230 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNB1P11230 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
CHRNB1P11230 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNB1P11230 AL121672.3-201ENST00000608644 468 ntBASIC19.3■□□□□ 0.68
CHRNB1P11230 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.3■□□□□ 0.68
CHRNB1P11230 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNB1P11230 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNB1P11230 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNB1P11230 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CHRNB1P11230 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNB1P11230 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNB1P11230 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.29■□□□□ 0.68
CHRNB1P11230 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNB1P11230 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNB1P11230 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNB1P11230 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNB1P11230 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNB1P11230 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CHRNB1P11230 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNB1P11230 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.29■□□□□ 0.68
CHRNB1P11230 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms