Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PF4V1P10720 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PF4V1P10720 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PF4V1P10720 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
PF4V1P10720 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PF4V1P10720 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PF4V1P10720 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PF4V1P10720 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.13■□□□□ 0.01
PF4V1P10720 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PF4V1P10720 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PF4V1P10720 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.13■□□□□ 0.01
PF4V1P10720 AC116562.2-201ENST00000507042 360 ntBASIC15.13■□□□□ 0.01
PF4V1P10720 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.13■□□□□ 0.01
PF4V1P10720 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.13■□□□□ 0.01
PF4V1P10720 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC15.13■□□□□ 0.01
PF4V1P10720 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PF4V1P10720 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PF4V1P10720 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.13■□□□□ 0.01
PF4V1P10720 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.13■□□□□ 0.01
PF4V1P10720 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC15.13■□□□□ 0.01
PF4V1P10720 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PF4V1P10720 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PF4V1P10720 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PF4V1P10720 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.13■□□□□ 0.01
PF4V1P10720 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC15.13■□□□□ 0.01
PF4V1P10720 ADM-207ENST00000530439 1839 ntTSL 2 BASIC15.13■□□□□ 0.01
PF4V1P10720 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PF4V1P10720 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PF4V1P10720 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PF4V1P10720 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PF4V1P10720 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PF4V1P10720 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PF4V1P10720 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.12■□□□□ 0.01
PF4V1P10720 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PF4V1P10720 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PF4V1P10720 LINC01465-201ENST00000408887 1940 ntBASIC15.12■□□□□ 0.01
PF4V1P10720 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
PF4V1P10720 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PF4V1P10720 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PF4V1P10720 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PF4V1P10720 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PF4V1P10720 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
PF4V1P10720 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.12■□□□□ 0.01
PF4V1P10720 AL137013.1-201ENST00000432946 1228 ntBASIC15.12■□□□□ 0.01
PF4V1P10720 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PF4V1P10720 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.12■□□□□ 0.01
PF4V1P10720 FITM1-202ENST00000559294 800 ntBASIC15.12■□□□□ 0.01
PF4V1P10720 C2orf69P3-201ENST00000565542 1120 ntBASIC15.12■□□□□ 0.01
PF4V1P10720 AL049597.2-201ENST00000565575 961 ntBASIC15.12■□□□□ 0.01
PF4V1P10720 AL160286.2-201ENST00000567150 934 ntBASIC15.12■□□□□ 0.01
PF4V1P10720 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.12■□□□□ 0.01
PF4V1P10720 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PF4V1P10720 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PF4V1P10720 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.12■□□□□ 0.01
PF4V1P10720 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.12■□□□□ 0.01
PF4V1P10720 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.12■□□□□ 0.01
PF4V1P10720 AC092865.7-201ENST00000641832 219 ntBASIC15.12■□□□□ 0.01
PF4V1P10720 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PF4V1P10720 ANKRD18DP-204ENST00000455355 1975 ntBASIC15.12■□□□□ 0.01
PF4V1P10720 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PF4V1P10720 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.12■□□□□ 0.01
PF4V1P10720 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PF4V1P10720 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PF4V1P10720 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.12■□□□□ 0.01
PF4V1P10720 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PF4V1P10720 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PF4V1P10720 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.11■□□□□ 0.01
PF4V1P10720 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PF4V1P10720 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC15.11■□□□□ 0.01
PF4V1P10720 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PF4V1P10720 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
PF4V1P10720 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.11■□□□□ 0.01
PF4V1P10720 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC15.11■□□□□ 0.01
PF4V1P10720 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PF4V1P10720 AC125437.2-201ENST00000625180 2167 ntBASIC15.11■□□□□ 0.01
PF4V1P10720 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PF4V1P10720 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
PF4V1P10720 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PF4V1P10720 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.11■□□□□ 0.01
PF4V1P10720 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.11■□□□□ 0.01
PF4V1P10720 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PF4V1P10720 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PF4V1P10720 LIN28AP1-201ENST00000429574 405 ntBASIC15.11■□□□□ 0.01
PF4V1P10720 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.11■□□□□ 0.01
PF4V1P10720 ATP5G1P1-201ENST00000448724 379 ntBASIC15.11■□□□□ 0.01
PF4V1P10720 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.11■□□□□ 0.01
PF4V1P10720 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PF4V1P10720 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PF4V1P10720 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PF4V1P10720 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
PF4V1P10720 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PF4V1P10720 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PF4V1P10720 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.1■□□□□ 0.01
PF4V1P10720 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PF4V1P10720 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PF4V1P10720 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PF4V1P10720 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.1■□□□□ 0.01
PF4V1P10720 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PF4V1P10720 KRT8P9-201ENST00000558927 1449 ntBASIC15.1■□□□□ 0.01
PF4V1P10720 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms