Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP1O94782 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.3■□□□□ 0.68
USP1O94782 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP1O94782 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP1O94782 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.3■□□□□ 0.68
USP1O94782 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP1O94782 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
USP1O94782 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP1O94782 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP1O94782 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
USP1O94782 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.3■□□□□ 0.68
USP1O94782 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.3■□□□□ 0.68
USP1O94782 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP1O94782 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP1O94782 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
USP1O94782 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP1O94782 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP1O94782 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.29■□□□□ 0.68
USP1O94782 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP1O94782 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP1O94782 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP1O94782 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP1O94782 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.29■□□□□ 0.68
USP1O94782 FAM201B-201ENST00000458407 597 ntBASIC19.29■□□□□ 0.68
USP1O94782 AP003097.1-201ENST00000530657 1135 ntBASIC19.29■□□□□ 0.68
USP1O94782 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.29■□□□□ 0.68
USP1O94782 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP1O94782 C1QL1P1-201ENST00000568105 661 ntBASIC19.29■□□□□ 0.68
USP1O94782 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.29■□□□□ 0.68
USP1O94782 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
USP1O94782 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP1O94782 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.29■□□□□ 0.68
USP1O94782 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP1O94782 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
USP1O94782 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.29■□□□□ 0.68
USP1O94782 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP1O94782 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
USP1O94782 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.29■□□□□ 0.68
USP1O94782 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP1O94782 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.29■□□□□ 0.68
USP1O94782 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP1O94782 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP1O94782 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
USP1O94782 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP1O94782 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP1O94782 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP1O94782 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.28■□□□□ 0.68
USP1O94782 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP1O94782 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.28■□□□□ 0.68
USP1O94782 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP1O94782 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP1O94782 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP1O94782 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP1O94782 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.28■□□□□ 0.68
USP1O94782 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.28■□□□□ 0.68
USP1O94782 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.28■□□□□ 0.68
USP1O94782 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.28■□□□□ 0.68
USP1O94782 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP1O94782 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
USP1O94782 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP1O94782 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.28■□□□□ 0.68
USP1O94782 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP1O94782 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.28■□□□□ 0.68
USP1O94782 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.28■□□□□ 0.68
USP1O94782 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.28■□□□□ 0.68
USP1O94782 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP1O94782 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP1O94782 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
USP1O94782 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP1O94782 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP1O94782 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.28■□□□□ 0.68
USP1O94782 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP1O94782 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP1O94782 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP1O94782 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP1O94782 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP1O94782 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
USP1O94782 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP1O94782 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP1O94782 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP1O94782 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP1O94782 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP1O94782 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP1O94782 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP1O94782 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP1O94782 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.27■□□□□ 0.68
USP1O94782 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP1O94782 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.27■□□□□ 0.68
USP1O94782 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.27■□□□□ 0.68
USP1O94782 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
USP1O94782 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP1O94782 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP1O94782 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.27■□□□□ 0.68
USP1O94782 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP1O94782 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.27■□□□□ 0.68
USP1O94782 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
USP1O94782 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP1O94782 KRT17P3-201ENST00000420566 1262 ntBASIC19.27■□□□□ 0.68
USP1O94782 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP1O94782 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms