Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH16O75309 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH16O75309 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CDH16O75309 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.29■□□□□ 0.68
CDH16O75309 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH16O75309 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH16O75309 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.29■□□□□ 0.68
CDH16O75309 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH16O75309 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH16O75309 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH16O75309 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH16O75309 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH16O75309 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDH16O75309 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH16O75309 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.28■□□□□ 0.68
CDH16O75309 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CDH16O75309 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDH16O75309 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH16O75309 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH16O75309 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.28■□□□□ 0.68
CDH16O75309 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH16O75309 AL390719.1-204ENST00000412397 1219 ntBASIC19.28■□□□□ 0.68
CDH16O75309 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDH16O75309 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
CDH16O75309 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.28■□□□□ 0.68
CDH16O75309 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDH16O75309 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDH16O75309 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.28■□□□□ 0.68
CDH16O75309 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.28■□□□□ 0.68
CDH16O75309 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH16O75309 AP000997.3-201ENST00000623333 2250 ntBASIC19.28■□□□□ 0.68
CDH16O75309 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH16O75309 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH16O75309 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CDH16O75309 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDH16O75309 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH16O75309 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDH16O75309 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CDH16O75309 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH16O75309 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.28■□□□□ 0.68
CDH16O75309 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.27■□□□□ 0.68
CDH16O75309 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH16O75309 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CDH16O75309 AC020916.1-201ENST00000587762 1774 ntBASIC19.27■□□□□ 0.68
CDH16O75309 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.27■□□□□ 0.68
CDH16O75309 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.27■□□□□ 0.68
CDH16O75309 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.27■□□□□ 0.68
CDH16O75309 LSM12P1-201ENST00000411836 588 ntBASIC19.27■□□□□ 0.68
CDH16O75309 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.27■□□□□ 0.68
CDH16O75309 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.27■□□□□ 0.68
CDH16O75309 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.27■□□□□ 0.68
CDH16O75309 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CDH16O75309 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDH16O75309 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.27■□□□□ 0.68
CDH16O75309 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.27■□□□□ 0.68
CDH16O75309 AC092437.1-201ENST00000624794 1048 ntBASIC19.27■□□□□ 0.68
CDH16O75309 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
CDH16O75309 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDH16O75309 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDH16O75309 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH16O75309 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CDH16O75309 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH16O75309 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.27■□□□□ 0.68
CDH16O75309 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDH16O75309 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CDH16O75309 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.27■□□□□ 0.67
CDH16O75309 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
CDH16O75309 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDH16O75309 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH16O75309 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH16O75309 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CDH16O75309 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH16O75309 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDH16O75309 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH16O75309 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDH16O75309 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH16O75309 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CDH16O75309 AC073592.3-201ENST00000625118 1834 ntBASIC19.26■□□□□ 0.67
CDH16O75309 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CDH16O75309 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH16O75309 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH16O75309 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH16O75309 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH16O75309 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH16O75309 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.26■□□□□ 0.67
CDH16O75309 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
CDH16O75309 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.26■□□□□ 0.67
CDH16O75309 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDH16O75309 AC007322.1-201ENST00000426983 750 ntBASIC19.26■□□□□ 0.67
CDH16O75309 YBX1P10-201ENST00000444752 975 ntBASIC19.26■□□□□ 0.67
CDH16O75309 AC093787.1-201ENST00000450396 207 ntBASIC19.26■□□□□ 0.67
CDH16O75309 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.26■□□□□ 0.67
CDH16O75309 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.26■□□□□ 0.67
CDH16O75309 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.26■□□□□ 0.67
CDH16O75309 IKBKGP1-201ENST00000612193 1073 ntBASIC19.26■□□□□ 0.67
CDH16O75309 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.26■□□□□ 0.67
CDH16O75309 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH16O75309 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH16O75309 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.26■□□□□ 0.67
CDH16O75309 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms