Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EXTL3O43909 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EXTL3O43909 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.72■□□□□ 0.91
EXTL3O43909 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EXTL3O43909 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
EXTL3O43909 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
EXTL3O43909 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EXTL3O43909 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
EXTL3O43909 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EXTL3O43909 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
EXTL3O43909 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
EXTL3O43909 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EXTL3O43909 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.71■□□□□ 0.91
EXTL3O43909 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.71■□□□□ 0.91
EXTL3O43909 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EXTL3O43909 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EXTL3O43909 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
EXTL3O43909 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EXTL3O43909 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.71■□□□□ 0.91
EXTL3O43909 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.71■□□□□ 0.91
EXTL3O43909 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.71■□□□□ 0.91
EXTL3O43909 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EXTL3O43909 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EXTL3O43909 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.71■□□□□ 0.91
EXTL3O43909 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
EXTL3O43909 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.71■□□□□ 0.91
EXTL3O43909 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EXTL3O43909 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.7■□□□□ 0.9
EXTL3O43909 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
EXTL3O43909 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EXTL3O43909 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EXTL3O43909 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EXTL3O43909 MMP23A-201ENST00000234610 1017 ntBASIC20.7■□□□□ 0.9
EXTL3O43909 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
EXTL3O43909 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EXTL3O43909 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.7■□□□□ 0.9
EXTL3O43909 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.7■□□□□ 0.9
EXTL3O43909 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
EXTL3O43909 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
EXTL3O43909 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EXTL3O43909 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
EXTL3O43909 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EXTL3O43909 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
EXTL3O43909 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.69■□□□□ 0.9
EXTL3O43909 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EXTL3O43909 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
EXTL3O43909 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
EXTL3O43909 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.69■□□□□ 0.9
EXTL3O43909 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.69■□□□□ 0.9
EXTL3O43909 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
EXTL3O43909 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.69■□□□□ 0.9
EXTL3O43909 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EXTL3O43909 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EXTL3O43909 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.69■□□□□ 0.9
EXTL3O43909 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
EXTL3O43909 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
EXTL3O43909 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EXTL3O43909 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
EXTL3O43909 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
EXTL3O43909 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
EXTL3O43909 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
EXTL3O43909 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EXTL3O43909 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EXTL3O43909 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
EXTL3O43909 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
EXTL3O43909 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EXTL3O43909 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
EXTL3O43909 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.69■□□□□ 0.9
EXTL3O43909 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.69■□□□□ 0.9
EXTL3O43909 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.69■□□□□ 0.9
EXTL3O43909 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.69■□□□□ 0.9
EXTL3O43909 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EXTL3O43909 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
EXTL3O43909 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
EXTL3O43909 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EXTL3O43909 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.68■□□□□ 0.9
EXTL3O43909 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.68■□□□□ 0.9
EXTL3O43909 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EXTL3O43909 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.68■□□□□ 0.9
EXTL3O43909 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.68■□□□□ 0.9
EXTL3O43909 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.68■□□□□ 0.9
EXTL3O43909 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.68■□□□□ 0.9
EXTL3O43909 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EXTL3O43909 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EXTL3O43909 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EXTL3O43909 KRT8P9-201ENST00000558927 1449 ntBASIC20.68■□□□□ 0.9
EXTL3O43909 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
EXTL3O43909 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
EXTL3O43909 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
EXTL3O43909 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.68■□□□□ 0.9
EXTL3O43909 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EXTL3O43909 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EXTL3O43909 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.68■□□□□ 0.9
EXTL3O43909 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EXTL3O43909 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.68■□□□□ 0.9
EXTL3O43909 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EXTL3O43909 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EXTL3O43909 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
EXTL3O43909 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
EXTL3O43909 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms