Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP3D1O14617 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.83■□□□□ 0.44
AP3D1O14617 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.83■□□□□ 0.44
AP3D1O14617 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
AP3D1O14617 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.83■□□□□ 0.44
AP3D1O14617 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP3D1O14617 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
AP3D1O14617 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP3D1O14617 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
AP3D1O14617 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.83■□□□□ 0.44
AP3D1O14617 AP003097.1-201ENST00000530657 1135 ntBASIC17.83■□□□□ 0.44
AP3D1O14617 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.83■□□□□ 0.44
AP3D1O14617 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
AP3D1O14617 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.83■□□□□ 0.44
AP3D1O14617 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.83■□□□□ 0.44
AP3D1O14617 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.83■□□□□ 0.44
AP3D1O14617 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP3D1O14617 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP3D1O14617 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP3D1O14617 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP3D1O14617 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP3D1O14617 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.83■□□□□ 0.44
AP3D1O14617 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
AP3D1O14617 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
AP3D1O14617 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.83■□□□□ 0.44
AP3D1O14617 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
AP3D1O14617 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
AP3D1O14617 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3D1O14617 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.82■□□□□ 0.44
AP3D1O14617 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.82■□□□□ 0.44
AP3D1O14617 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3D1O14617 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
AP3D1O14617 AC141586.3-201ENST00000562166 1838 ntBASIC17.82■□□□□ 0.44
AP3D1O14617 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3D1O14617 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3D1O14617 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
AP3D1O14617 YBX1P10-201ENST00000444752 975 ntBASIC17.82■□□□□ 0.44
AP3D1O14617 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
AP3D1O14617 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.82■□□□□ 0.44
AP3D1O14617 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
AP3D1O14617 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
AP3D1O14617 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3D1O14617 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
AP3D1O14617 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3D1O14617 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.82■□□□□ 0.44
AP3D1O14617 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
AP3D1O14617 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
AP3D1O14617 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.82■□□□□ 0.44
AP3D1O14617 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.82■□□□□ 0.44
AP3D1O14617 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
AP3D1O14617 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
AP3D1O14617 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP3D1O14617 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.81■□□□□ 0.44
AP3D1O14617 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP3D1O14617 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.81■□□□□ 0.44
AP3D1O14617 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP3D1O14617 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP3D1O14617 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP3D1O14617 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.81■□□□□ 0.44
AP3D1O14617 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
AP3D1O14617 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.81■□□□□ 0.44
AP3D1O14617 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
AP3D1O14617 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP3D1O14617 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.81■□□□□ 0.44
AP3D1O14617 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP3D1O14617 AC233263.1-201ENST00000578059 224 ntBASIC17.81■□□□□ 0.44
AP3D1O14617 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.81■□□□□ 0.44
AP3D1O14617 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP3D1O14617 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.81■□□□□ 0.44
AP3D1O14617 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP3D1O14617 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP3D1O14617 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP3D1O14617 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP3D1O14617 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP3D1O14617 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP3D1O14617 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP3D1O14617 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3D1O14617 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3D1O14617 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3D1O14617 TEX21P-204ENST00000641479 1693 ntBASIC17.8■□□□□ 0.44
AP3D1O14617 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3D1O14617 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP3D1O14617 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
AP3D1O14617 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
AP3D1O14617 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3D1O14617 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP3D1O14617 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3D1O14617 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3D1O14617 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3D1O14617 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP3D1O14617 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.8■□□□□ 0.44
AP3D1O14617 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3D1O14617 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.8■□□□□ 0.44
AP3D1O14617 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP3D1O14617 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.8■□□□□ 0.44
AP3D1O14617 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.8■□□□□ 0.44
AP3D1O14617 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.8■□□□□ 0.44
AP3D1O14617 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
AP3D1O14617 AL049812.1-201ENST00000432563 2267 ntBASIC17.8■□□□□ 0.44
AP3D1O14617 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms