Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.28■□□□□ 0.68
AP3B1O00203 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3B1O00203 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
AP3B1O00203 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
AP3B1O00203 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
AP3B1O00203 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3B1O00203 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.28■□□□□ 0.68
AP3B1O00203 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.28■□□□□ 0.68
AP3B1O00203 AC124016.1-201ENST00000609552 612 ntBASIC19.28■□□□□ 0.68
AP3B1O00203 AC131212.4-201ENST00000623606 975 ntBASIC19.28■□□□□ 0.68
AP3B1O00203 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.28■□□□□ 0.68
AP3B1O00203 AC083906.6-201ENST00000641366 219 ntBASIC19.28■□□□□ 0.68
AP3B1O00203 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3B1O00203 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.28■□□□□ 0.68
AP3B1O00203 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3B1O00203 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3B1O00203 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
AP3B1O00203 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3B1O00203 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3B1O00203 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
AP3B1O00203 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3B1O00203 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3B1O00203 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.27■□□□□ 0.68
AP3B1O00203 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.27■□□□□ 0.68
AP3B1O00203 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3B1O00203 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3B1O00203 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
AP3B1O00203 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3B1O00203 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3B1O00203 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3B1O00203 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
AP3B1O00203 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
AP3B1O00203 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.27■□□□□ 0.68
AP3B1O00203 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.27■□□□□ 0.68
AP3B1O00203 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.27■□□□□ 0.68
AP3B1O00203 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
AP3B1O00203 TSPY23P-201ENST00000440136 739 ntBASIC19.27■□□□□ 0.68
AP3B1O00203 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.27■□□□□ 0.68
AP3B1O00203 AC233263.1-201ENST00000578059 224 ntBASIC19.27■□□□□ 0.68
AP3B1O00203 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.27■□□□□ 0.68
AP3B1O00203 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.27■□□□□ 0.68
AP3B1O00203 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
AP3B1O00203 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
AP3B1O00203 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3B1O00203 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3B1O00203 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3B1O00203 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.27■□□□□ 0.68
AP3B1O00203 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3B1O00203 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3B1O00203 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
AP3B1O00203 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
AP3B1O00203 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
AP3B1O00203 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.27■□□□□ 0.67
AP3B1O00203 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
AP3B1O00203 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
AP3B1O00203 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
AP3B1O00203 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
AP3B1O00203 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP3B1O00203 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.26■□□□□ 0.67
AP3B1O00203 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
AP3B1O00203 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
AP3B1O00203 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP3B1O00203 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
AP3B1O00203 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
AP3B1O00203 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
AP3B1O00203 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
AP3B1O00203 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
AP3B1O00203 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.26■□□□□ 0.67
AP3B1O00203 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP3B1O00203 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP3B1O00203 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP3B1O00203 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP3B1O00203 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.26■□□□□ 0.67
AP3B1O00203 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.26■□□□□ 0.67
AP3B1O00203 AL353807.1-201ENST00000427475 662 ntBASIC19.26■□□□□ 0.67
AP3B1O00203 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.26■□□□□ 0.67
AP3B1O00203 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
AP3B1O00203 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.26■□□□□ 0.67
AP3B1O00203 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.26■□□□□ 0.67
AP3B1O00203 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.26■□□□□ 0.67
AP3B1O00203 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
AP3B1O00203 AL353708.3-201ENST00000610272 989 ntBASIC19.26■□□□□ 0.67
AP3B1O00203 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.26■□□□□ 0.67
AP3B1O00203 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
AP3B1O00203 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP3B1O00203 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
AP3B1O00203 AL031598.1-201ENST00000561511 1773 ntBASIC19.26■□□□□ 0.67
AP3B1O00203 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
AP3B1O00203 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.26■□□□□ 0.67
AP3B1O00203 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP3B1O00203 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
AP3B1O00203 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
AP3B1O00203 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
AP3B1O00203 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP3B1O00203 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.25■□□□□ 0.67
AP3B1O00203 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP3B1O00203 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
AP3B1O00203 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.25■□□□□ 0.67
AP3B1O00203 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP3B1O00203 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms