Protein–RNA interactions for Protein: A6NNY8

USP27X, Ubiquitin carboxyl-terminal hydrolase 27, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP27XA6NNY8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.6■□□□□ 0.89
USP27XA6NNY8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP27XA6NNY8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP27XA6NNY8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.6■□□□□ 0.89
USP27XA6NNY8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP27XA6NNY8 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
USP27XA6NNY8 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP27XA6NNY8 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
USP27XA6NNY8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP27XA6NNY8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP27XA6NNY8 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.59■□□□□ 0.89
USP27XA6NNY8 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
USP27XA6NNY8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP27XA6NNY8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.59■□□□□ 0.89
USP27XA6NNY8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
USP27XA6NNY8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.59■□□□□ 0.89
USP27XA6NNY8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.59■□□□□ 0.89
USP27XA6NNY8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
USP27XA6NNY8 AC013268.1-206ENST00000638368 961 ntBASIC20.59■□□□□ 0.89
USP27XA6NNY8 AC112229.1-201ENST00000639295 961 ntBASIC20.59■□□□□ 0.89
USP27XA6NNY8 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP27XA6NNY8 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
USP27XA6NNY8 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP27XA6NNY8 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
USP27XA6NNY8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
USP27XA6NNY8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.59■□□□□ 0.89
USP27XA6NNY8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
USP27XA6NNY8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
USP27XA6NNY8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.58■□□□□ 0.89
USP27XA6NNY8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP27XA6NNY8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
USP27XA6NNY8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP27XA6NNY8 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP27XA6NNY8 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
USP27XA6NNY8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.58■□□□□ 0.89
USP27XA6NNY8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.58■□□□□ 0.89
USP27XA6NNY8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.58■□□□□ 0.89
USP27XA6NNY8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.58■□□□□ 0.88
USP27XA6NNY8 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP27XA6NNY8 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.58■□□□□ 0.88
USP27XA6NNY8 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.58■□□□□ 0.88
USP27XA6NNY8 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
USP27XA6NNY8 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.58■□□□□ 0.88
USP27XA6NNY8 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP27XA6NNY8 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP27XA6NNY8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.57■□□□□ 0.88
USP27XA6NNY8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP27XA6NNY8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
USP27XA6NNY8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.57■□□□□ 0.88
USP27XA6NNY8 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP27XA6NNY8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP27XA6NNY8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
USP27XA6NNY8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP27XA6NNY8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP27XA6NNY8 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.57■□□□□ 0.88
USP27XA6NNY8 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP27XA6NNY8 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP27XA6NNY8 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.57■□□□□ 0.88
USP27XA6NNY8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
USP27XA6NNY8 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP27XA6NNY8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.57■□□□□ 0.88
USP27XA6NNY8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP27XA6NNY8 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP27XA6NNY8 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP27XA6NNY8 PRORSD1P-202ENST00000563365 2154 ntBASIC20.56■□□□□ 0.88
USP27XA6NNY8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.56■□□□□ 0.88
USP27XA6NNY8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP27XA6NNY8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP27XA6NNY8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP27XA6NNY8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP27XA6NNY8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
USP27XA6NNY8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP27XA6NNY8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
USP27XA6NNY8 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP27XA6NNY8 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP27XA6NNY8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP27XA6NNY8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP27XA6NNY8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP27XA6NNY8 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.56■□□□□ 0.88
USP27XA6NNY8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.56■□□□□ 0.88
USP27XA6NNY8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
USP27XA6NNY8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
USP27XA6NNY8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.56■□□□□ 0.88
USP27XA6NNY8 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP27XA6NNY8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP27XA6NNY8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP27XA6NNY8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
USP27XA6NNY8 AC080080.1-201ENST00000625121 2420 ntBASIC20.56■□□□□ 0.88
USP27XA6NNY8 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
USP27XA6NNY8 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP27XA6NNY8 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP27XA6NNY8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP27XA6NNY8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
USP27XA6NNY8 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP27XA6NNY8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP27XA6NNY8 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP27XA6NNY8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.56■□□□□ 0.88
USP27XA6NNY8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
USP27XA6NNY8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP27XA6NNY8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms