Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
LINC01548A6NM66 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC15.06■□□□□ 0
LINC01548A6NM66 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
LINC01548A6NM66 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LINC01548A6NM66 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.06■□□□□ 0
LINC01548A6NM66 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.06■□□□□ 0
LINC01548A6NM66 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC01548A6NM66 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC01548A6NM66 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.06■□□□□ 0
LINC01548A6NM66 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
LINC01548A6NM66 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC01548A6NM66 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
LINC01548A6NM66 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC01548A6NM66 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC01548A6NM66 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LINC01548A6NM66 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC01548A6NM66 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.06■□□□□ 0
LINC01548A6NM66 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.06■□□□□ 0
LINC01548A6NM66 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.06■□□□□ 0
LINC01548A6NM66 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LINC01548A6NM66 AP005242.2-201ENST00000580065 1175 ntBASIC15.06■□□□□ 0
LINC01548A6NM66 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.06■□□□□ 0
LINC01548A6NM66 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.06■□□□□ 0
LINC01548A6NM66 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.06■□□□□ 0
LINC01548A6NM66 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
LINC01548A6NM66 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.06■□□□□ 0
LINC01548A6NM66 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.06■□□□□ 0
LINC01548A6NM66 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.06■□□□□ 0
LINC01548A6NM66 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LINC01548A6NM66 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC01548A6NM66 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.05■□□□□ 0
LINC01548A6NM66 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
LINC01548A6NM66 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LINC01548A6NM66 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LINC01548A6NM66 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LINC01548A6NM66 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
LINC01548A6NM66 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.05■□□□□ 0
LINC01548A6NM66 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LINC01548A6NM66 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LINC01548A6NM66 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC15.05■□□□□ -0
LINC01548A6NM66 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.05■□□□□ -0
LINC01548A6NM66 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.05■□□□□ -0
LINC01548A6NM66 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.05■□□□□ -0
LINC01548A6NM66 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.05■□□□□ -0
LINC01548A6NM66 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.05■□□□□ -0
LINC01548A6NM66 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
LINC01548A6NM66 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.05■□□□□ -0
LINC01548A6NM66 NAPSB-206ENST00000562112 1266 ntBASIC15.05■□□□□ -0
LINC01548A6NM66 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.05■□□□□ -0
LINC01548A6NM66 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
LINC01548A6NM66 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
LINC01548A6NM66 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.05■□□□□ -0
LINC01548A6NM66 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.05■□□□□ -0
LINC01548A6NM66 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LINC01548A6NM66 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.05■□□□□ -0
LINC01548A6NM66 AC141586.3-201ENST00000562166 1838 ntBASIC15.05■□□□□ -0
LINC01548A6NM66 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.05■□□□□ -0
LINC01548A6NM66 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.05■□□□□ -0
LINC01548A6NM66 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LINC01548A6NM66 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
LINC01548A6NM66 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LINC01548A6NM66 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
LINC01548A6NM66 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01548A6NM66 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01548A6NM66 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01548A6NM66 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01548A6NM66 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01548A6NM66 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01548A6NM66 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINC01548A6NM66 PTGES2-AS1-201ENST00000443493 2100 ntBASIC15.04■□□□□ -0
LINC01548A6NM66 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
LINC01548A6NM66 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.04■□□□□ -0
LINC01548A6NM66 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.04■□□□□ -0
LINC01548A6NM66 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01548A6NM66 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01548A6NM66 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01548A6NM66 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01548A6NM66 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01548A6NM66 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.04■□□□□ -0
LINC01548A6NM66 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01548A6NM66 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.04■□□□□ -0
LINC01548A6NM66 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINC01548A6NM66 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01548A6NM66 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01548A6NM66 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINC01548A6NM66 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.04■□□□□ -0
LINC01548A6NM66 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.04■□□□□ -0
LINC01548A6NM66 TSPY21P-201ENST00000433481 731 ntBASIC15.04■□□□□ -0
LINC01548A6NM66 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINC01548A6NM66 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.04■□□□□ -0
LINC01548A6NM66 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01548A6NM66 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.04■□□□□ -0
LINC01548A6NM66 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01548A6NM66 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01548A6NM66 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01548A6NM66 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01548A6NM66 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
LINC01548A6NM66 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC01548A6NM66 IRX1P1-201ENST00000438849 1838 ntBASIC15.03■□□□□ -0
LINC01548A6NM66 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms