Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM9A6NGZ8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM9A6NGZ8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM9A6NGZ8 AC096733.2-201ENST00000609937 1394 ntBASIC13.83□□□□□ -0.2
SMIM9A6NGZ8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
SMIM9A6NGZ8 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM9A6NGZ8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 AC011270.2-201ENST00000624293 2550 ntBASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 LINC01465-201ENST00000408887 1940 ntBASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 AL355075.4-201ENST00000554988 638 ntBASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 SLC25A1P4-201ENST00000567977 778 ntBASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC13.82□□□□□ -0.2
SMIM9A6NGZ8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SMIM9A6NGZ8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SMIM9A6NGZ8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SMIM9A6NGZ8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC13.81□□□□□ -0.2
SMIM9A6NGZ8 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM9A6NGZ8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SMIM9A6NGZ8 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM9A6NGZ8 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM9A6NGZ8 MMP23A-201ENST00000234610 1017 ntBASIC13.81□□□□□ -0.2
SMIM9A6NGZ8 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.81□□□□□ -0.2
SMIM9A6NGZ8 CA15P1-201ENST00000481698 905 ntBASIC13.81□□□□□ -0.2
SMIM9A6NGZ8 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC13.81□□□□□ -0.2
SMIM9A6NGZ8 FITM1-202ENST00000559294 800 ntBASIC13.81□□□□□ -0.2
SMIM9A6NGZ8 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.81□□□□□ -0.2
SMIM9A6NGZ8 CKBP1-201ENST00000565489 1086 ntBASIC13.81□□□□□ -0.2
SMIM9A6NGZ8 C2orf69P3-201ENST00000565542 1120 ntBASIC13.81□□□□□ -0.2
SMIM9A6NGZ8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC13.81□□□□□ -0.2
SMIM9A6NGZ8 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM9A6NGZ8 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC13.81□□□□□ -0.2
SMIM9A6NGZ8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC13.81□□□□□ -0.2
SMIM9A6NGZ8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM9A6NGZ8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM9A6NGZ8 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC13.81□□□□□ -0.2
SMIM9A6NGZ8 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM9A6NGZ8 SDHAP1-207ENST00000440850 2000 ntBASIC13.81□□□□□ -0.2
SMIM9A6NGZ8 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM9A6NGZ8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC13.81□□□□□ -0.2
SMIM9A6NGZ8 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 CRYGFP-201ENST00000418459 633 ntBASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM9A6NGZ8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms