Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC29.39■■■□□ 2.3
PLEKHD1A6NEE1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
PLEKHD1A6NEE1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC29.39■■■□□ 2.3
PLEKHD1A6NEE1 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC29.39■■■□□ 2.3
PLEKHD1A6NEE1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC29.39■■■□□ 2.3
PLEKHD1A6NEE1 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
PLEKHD1A6NEE1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC29.39■■■□□ 2.3
PLEKHD1A6NEE1 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC29.39■■■□□ 2.3
PLEKHD1A6NEE1 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
PLEKHD1A6NEE1 GAS2L1P1-201ENST00000420145 1480 ntBASIC29.39■■■□□ 2.3
PLEKHD1A6NEE1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
PLEKHD1A6NEE1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
PLEKHD1A6NEE1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC29.39■■■□□ 2.3
PLEKHD1A6NEE1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
PLEKHD1A6NEE1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC29.39■■■□□ 2.29
PLEKHD1A6NEE1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
PLEKHD1A6NEE1 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
PLEKHD1A6NEE1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC29.38■■■□□ 2.29
PLEKHD1A6NEE1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC29.38■■■□□ 2.29
PLEKHD1A6NEE1 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
PLEKHD1A6NEE1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC29.38■■■□□ 2.29
PLEKHD1A6NEE1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC29.38■■■□□ 2.29
PLEKHD1A6NEE1 CIB2-208ENST00000560618 804 ntTSL 2 BASIC29.38■■■□□ 2.29
PLEKHD1A6NEE1 AC091304.2-201ENST00000564639 760 ntBASIC29.38■■■□□ 2.29
PLEKHD1A6NEE1 AL121772.3-201ENST00000610840 674 ntBASIC29.38■■■□□ 2.29
PLEKHD1A6NEE1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
PLEKHD1A6NEE1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
PLEKHD1A6NEE1 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
PLEKHD1A6NEE1 KRT8P3-201ENST00000519669 1449 ntBASIC29.37■■■□□ 2.29
PLEKHD1A6NEE1 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC29.37■■■□□ 2.29
PLEKHD1A6NEE1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
PLEKHD1A6NEE1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC29.37■■■□□ 2.29
PLEKHD1A6NEE1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
PLEKHD1A6NEE1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC29.37■■■□□ 2.29
PLEKHD1A6NEE1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
PLEKHD1A6NEE1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
PLEKHD1A6NEE1 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC29.37■■■□□ 2.29
PLEKHD1A6NEE1 PNN-202ENST00000553331 656 ntTSL 3 BASIC29.37■■■□□ 2.29
PLEKHD1A6NEE1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
PLEKHD1A6NEE1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
PLEKHD1A6NEE1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
PLEKHD1A6NEE1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC29.37■■■□□ 2.29
PLEKHD1A6NEE1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
PLEKHD1A6NEE1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
PLEKHD1A6NEE1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC29.36■■■□□ 2.29
PLEKHD1A6NEE1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
PLEKHD1A6NEE1 LINC00265-3P-201ENST00000447588 903 ntBASIC29.36■■■□□ 2.29
PLEKHD1A6NEE1 AC079781.3-201ENST00000449110 356 ntBASIC29.36■■■□□ 2.29
PLEKHD1A6NEE1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC29.36■■■□□ 2.29
PLEKHD1A6NEE1 AP000867.3-201ENST00000524675 377 ntBASIC29.36■■■□□ 2.29
PLEKHD1A6NEE1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
PLEKHD1A6NEE1 GXYLT1P4-201ENST00000613576 1192 ntBASIC29.36■■■□□ 2.29
PLEKHD1A6NEE1 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC29.36■■■□□ 2.29
PLEKHD1A6NEE1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC29.36■■■□□ 2.29
PLEKHD1A6NEE1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC29.36■■■□□ 2.29
PLEKHD1A6NEE1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
PLEKHD1A6NEE1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
PLEKHD1A6NEE1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
PLEKHD1A6NEE1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC29.36■■■□□ 2.29
PLEKHD1A6NEE1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
PLEKHD1A6NEE1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
PLEKHD1A6NEE1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
PLEKHD1A6NEE1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC29.35■■■□□ 2.29
PLEKHD1A6NEE1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
PLEKHD1A6NEE1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC29.35■■■□□ 2.29
PLEKHD1A6NEE1 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC29.35■■■□□ 2.29
PLEKHD1A6NEE1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
PLEKHD1A6NEE1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
PLEKHD1A6NEE1 AC012615.1-201ENST00000565797 1299 ntBASIC29.35■■■□□ 2.29
PLEKHD1A6NEE1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
PLEKHD1A6NEE1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
PLEKHD1A6NEE1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
PLEKHD1A6NEE1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
PLEKHD1A6NEE1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PLEKHD1A6NEE1 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
PLEKHD1A6NEE1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PLEKHD1A6NEE1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PLEKHD1A6NEE1 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PLEKHD1A6NEE1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC29.34■■■□□ 2.29
PLEKHD1A6NEE1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PLEKHD1A6NEE1 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
PLEKHD1A6NEE1 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
PLEKHD1A6NEE1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PLEKHD1A6NEE1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
PLEKHD1A6NEE1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
PLEKHD1A6NEE1 KRT18P31-201ENST00000506277 1292 ntBASIC29.33■■■□□ 2.29
PLEKHD1A6NEE1 FOSL1P1-201ENST00000511041 816 ntBASIC29.33■■■□□ 2.29
PLEKHD1A6NEE1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
PLEKHD1A6NEE1 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC29.33■■■□□ 2.29
PLEKHD1A6NEE1 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC29.33■■■□□ 2.29
PLEKHD1A6NEE1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PLEKHD1A6NEE1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
PLEKHD1A6NEE1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PLEKHD1A6NEE1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PLEKHD1A6NEE1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
PLEKHD1A6NEE1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
PLEKHD1A6NEE1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC29.32■■■□□ 2.28
PLEKHD1A6NEE1 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC29.32■■■□□ 2.28
PLEKHD1A6NEE1 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC29.32■■■□□ 2.28
PLEKHD1A6NEE1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC29.32■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms