Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC163A0A0D9SF12 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC163A0A0D9SF12 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC163A0A0D9SF12 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC163A0A0D9SF12 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
CCDC163A0A0D9SF12 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC163A0A0D9SF12 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC163A0A0D9SF12 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC163A0A0D9SF12 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 MCCD1P1-208ENST00000445732 328 ntBASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 AC009078.2-202ENST00000463353 338 ntBASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 AC006538.3-201ENST00000612495 578 ntBASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 AC023511.2-201ENST00000618803 211 ntBASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 AL031008.1-201ENST00000619963 541 ntBASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 AC036111.1-201ENST00000533973 1582 ntBASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 AL391807.1-203ENST00000604392 2365 ntBASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CCDC163A0A0D9SF12 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CCDC163A0A0D9SF12 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC163A0A0D9SF12 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC163A0A0D9SF12 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC163A0A0D9SF12 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC163A0A0D9SF12 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC163A0A0D9SF12 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC163A0A0D9SF12 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC163A0A0D9SF12 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC163A0A0D9SF12 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC163A0A0D9SF12 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
CCDC163A0A0D9SF12 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC163A0A0D9SF12 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC163A0A0D9SF12 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC163A0A0D9SF12 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC163A0A0D9SF12 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC163A0A0D9SF12 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC163A0A0D9SF12 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC163A0A0D9SF12 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC163A0A0D9SF12 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
CCDC163A0A0D9SF12 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CCDC163A0A0D9SF12 AC112497.1-201ENST00000624824 639 ntBASIC18.87■□□□□ 0.61
CCDC163A0A0D9SF12 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CCDC163A0A0D9SF12 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC163A0A0D9SF12 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC163A0A0D9SF12 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC163A0A0D9SF12 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC163A0A0D9SF12 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC163A0A0D9SF12 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC163A0A0D9SF12 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC163A0A0D9SF12 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC163A0A0D9SF12 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC163A0A0D9SF12 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC163A0A0D9SF12 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC163A0A0D9SF12 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC163A0A0D9SF12 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC163A0A0D9SF12 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC163A0A0D9SF12 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC163A0A0D9SF12 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC163A0A0D9SF12 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC163A0A0D9SF12 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.86■□□□□ 0.61
CCDC163A0A0D9SF12 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC163A0A0D9SF12 AL662844.1-201ENST00000546340 181 ntBASIC18.86■□□□□ 0.61
CCDC163A0A0D9SF12 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC163A0A0D9SF12 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.86■□□□□ 0.61
CCDC163A0A0D9SF12 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CCDC163A0A0D9SF12 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC163A0A0D9SF12 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CCDC163A0A0D9SF12 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC163A0A0D9SF12 AL691432.2-201ENST00000607222 2038 ntBASIC18.86■□□□□ 0.61
CCDC163A0A0D9SF12 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CCDC163A0A0D9SF12 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC163A0A0D9SF12 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC163A0A0D9SF12 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CCDC163A0A0D9SF12 KRT8P7-201ENST00000533003 1432 ntBASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms