Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 EIF4EP2-201ENST00000422816 654 ntBASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 AC004975.1-201ENST00000428733 208 ntBASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 RPL23AP25-201ENST00000430973 463 ntBASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 GAPDHP27-201ENST00000447427 1020 ntBASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 NUTF2P7-201ENST00000453086 375 ntBASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 RNU6-1218P-201ENST00000458990 108 ntBASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 SNORA25.14-201ENST00000516481 132 ntBASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 Y_RNA.687-201ENST00000516558 91 ntBASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 MIR6716-201ENST00000613413 80 ntBASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 AL161637.1-201ENST00000622380 412 ntBASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 AC091953.5-201ENST00000622919 233 ntBASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 AL031119.1-201ENST00000404707 1879 ntBASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 AC116667.1-201ENST00000604855 2072 ntBASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 Y_RNA.83-201ENST00000363005 113 ntBASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 RNU1-130P-201ENST00000363930 160 ntBASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 RNU6-740P-201ENST00000364734 105 ntBASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 RNA5SP479-201ENST00000364858 117 ntBASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 EIF4HP2-201ENST00000424380 563 ntBASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 Z95327.1-201ENST00000446082 482 ntBASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 RPL7P49-201ENST00000471402 708 ntBASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 RN7SL41P-201ENST00000476144 297 ntBASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 AP000926.1-201ENST00000479573 241 ntBASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 AC020890.1-201ENST00000491837 504 ntBASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 AC107393.1-201ENST00000512403 346 ntBASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 AC015795.1-201ENST00000513669 327 ntBASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 RN7SKP21-201ENST00000516503 220 ntBASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 RNU6-911P-201ENST00000516523 104 ntBASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 DEFB108E-201ENST00000524692 240 ntBASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 MIR3939-201ENST00000582614 106 ntBASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 MZT1P2-201ENST00000604387 248 ntBASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 AC004832.4-201ENST00000608952 331 ntBASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 MIR1244-1-201ENST00000612829 85 ntBASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 SNHG22-203ENST00000617833 660 ntBASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 AC005086.4-201ENST00000623065 213 ntBASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 MIR1244-3-201ENST00000635744 85 ntBASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 MIR1244-2-201ENST00000636449 85 ntBASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 MIR1244-4-202ENST00000636813 85 ntBASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.8□□□□□ -1.64
SHKBP1Q8TBC3 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SHKBP1Q8TBC3 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.79□□□□□ -1.64
SHKBP1Q8TBC3 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHKBP1Q8TBC3 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.79□□□□□ -1.64
SHKBP1Q8TBC3 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SHKBP1Q8TBC3 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHKBP1Q8TBC3 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SHKBP1Q8TBC3 snoU2_19.2-201ENST00000363024 80 ntBASIC4.79□□□□□ -1.64
SHKBP1Q8TBC3 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.79□□□□□ -1.64
SHKBP1Q8TBC3 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.79□□□□□ -1.64
SHKBP1Q8TBC3 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.79□□□□□ -1.64
SHKBP1Q8TBC3 SETP5-201ENST00000437270 562 ntBASIC4.79□□□□□ -1.64
SHKBP1Q8TBC3 RPL23AP93-201ENST00000440847 484 ntBASIC4.79□□□□□ -1.64
SHKBP1Q8TBC3 DAP3P1-201ENST00000441522 278 ntBASIC4.79□□□□□ -1.64
SHKBP1Q8TBC3 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.79□□□□□ -1.64
SHKBP1Q8TBC3 AC008958.1-201ENST00000511047 682 ntBASIC4.79□□□□□ -1.64
SHKBP1Q8TBC3 NDUFB4P9-201ENST00000511646 388 ntBASIC4.79□□□□□ -1.64
SHKBP1Q8TBC3 IGKV2-23-201ENST00000518729 323 ntBASIC4.79□□□□□ -1.64
SHKBP1Q8TBC3 AC104576.1-201ENST00000524225 88 ntBASIC4.79□□□□□ -1.64
SHKBP1Q8TBC3 AP006587.4-201ENST00000526053 529 ntBASIC4.79□□□□□ -1.64
SHKBP1Q8TBC3 MIR3138-201ENST00000585238 82 ntBASIC4.79□□□□□ -1.64
SHKBP1Q8TBC3 AC012119.1-201ENST00000603184 222 ntBASIC4.79□□□□□ -1.64
SHKBP1Q8TBC3 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHKBP1Q8TBC3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.79□□□□□ -1.64
SHKBP1Q8TBC3 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.79□□□□□ -1.64
SHKBP1Q8TBC3 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SHKBP1Q8TBC3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
SHKBP1Q8TBC3 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.79□□□□□ -1.64
SHKBP1Q8TBC3 HSPA8P1-201ENST00000425843 1833 ntBASIC4.79□□□□□ -1.64
SHKBP1Q8TBC3 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SHKBP1Q8TBC3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.78□□□□□ -1.64
SHKBP1Q8TBC3 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHKBP1Q8TBC3 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms