Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 MTND5P7-201ENST00000413558 1798 ntBASIC3.98□□□□□ -1.77
RHBDL3P58872 API5P2-201ENST00000397055 1498 ntBASIC3.98□□□□□ -1.77
RHBDL3P58872 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RHBDL3P58872 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
RHBDL3P58872 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.98□□□□□ -1.77
RHBDL3P58872 AC008669.1-201ENST00000565823 2178 ntBASIC3.97□□□□□ -1.77
RHBDL3P58872 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.97□□□□□ -1.77
RHBDL3P58872 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RHBDL3P58872 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RHBDL3P58872 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
RHBDL3P58872 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RHBDL3P58872 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RHBDL3P58872 UBE2L2-201ENST00000254302 429 ntBASIC3.97□□□□□ -1.77
RHBDL3P58872 RNU4-1-201ENST00000363925 141 ntBASIC3.97□□□□□ -1.77
RHBDL3P58872 RPS3AP36-201ENST00000398190 775 ntBASIC3.97□□□□□ -1.77
RHBDL3P58872 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.97□□□□□ -1.77
RHBDL3P58872 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.97□□□□□ -1.77
RHBDL3P58872 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.97□□□□□ -1.77
RHBDL3P58872 SNRPEP9-201ENST00000436794 238 ntBASIC3.97□□□□□ -1.77
RHBDL3P58872 AC073614.1-201ENST00000438690 650 ntBASIC3.97□□□□□ -1.77
RHBDL3P58872 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.97□□□□□ -1.77
RHBDL3P58872 MTCO3P20-201ENST00000454926 688 ntBASIC3.97□□□□□ -1.77
RHBDL3P58872 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.97□□□□□ -1.77
RHBDL3P58872 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.97□□□□□ -1.77
RHBDL3P58872 FCF1P3-201ENST00000496394 590 ntBASIC3.97□□□□□ -1.77
RHBDL3P58872 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.97□□□□□ -1.77
RHBDL3P58872 Vault.3-201ENST00000516676 95 ntBASIC3.97□□□□□ -1.77
RHBDL3P58872 RNU2-46P-201ENST00000517038 113 ntBASIC3.97□□□□□ -1.77
RHBDL3P58872 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.97□□□□□ -1.77
RHBDL3P58872 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
RHBDL3P58872 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.97□□□□□ -1.77
RHBDL3P58872 MIR4738-201ENST00000579134 87 ntBASIC3.97□□□□□ -1.77
RHBDL3P58872 AC087752.4-201ENST00000605911 462 ntBASIC3.97□□□□□ -1.77
RHBDL3P58872 AP002360.4-201ENST00000606980 481 ntBASIC3.97□□□□□ -1.77
RHBDL3P58872 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.97□□□□□ -1.77
RHBDL3P58872 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.97□□□□□ -1.77
RHBDL3P58872 AL513302.2-201ENST00000562313 1842 ntBASIC3.97□□□□□ -1.77
RHBDL3P58872 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RHBDL3P58872 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.96□□□□□ -1.78
RHBDL3P58872 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
RHBDL3P58872 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RHBDL3P58872 RNU1-70P-201ENST00000362618 164 ntBASIC3.96□□□□□ -1.78
RHBDL3P58872 RNY4P34-201ENST00000364779 95 ntBASIC3.96□□□□□ -1.78
RHBDL3P58872 CD24P4-201ENST00000382840 243 ntBASIC3.96□□□□□ -1.78
RHBDL3P58872 SNORD116-9-201ENST00000384000 95 ntBASIC3.96□□□□□ -1.78
RHBDL3P58872 SNORD116-3-201ENST00000384287 95 ntBASIC3.96□□□□□ -1.78
RHBDL3P58872 SNORD116-7-201ENST00000384404 95 ntBASIC3.96□□□□□ -1.78
RHBDL3P58872 SNORD116-5-201ENST00000384462 95 ntBASIC3.96□□□□□ -1.78
RHBDL3P58872 SNORA48.5-201ENST00000391143 135 ntBASIC3.96□□□□□ -1.78
RHBDL3P58872 AC127391.1-201ENST00000411737 98 ntBASIC3.96□□□□□ -1.78
RHBDL3P58872 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.96□□□□□ -1.78
RHBDL3P58872 OR2AS1P-201ENST00000427827 319 ntBASIC3.96□□□□□ -1.78
RHBDL3P58872 MTND4P25-201ENST00000441039 533 ntBASIC3.96□□□□□ -1.78
RHBDL3P58872 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.96□□□□□ -1.78
RHBDL3P58872 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.96□□□□□ -1.78
RHBDL3P58872 RNU6-956P-201ENST00000458868 103 ntBASIC3.96□□□□□ -1.78
RHBDL3P58872 AC068724.1-201ENST00000487100 792 ntBASIC3.96□□□□□ -1.78
RHBDL3P58872 AC110794.1-201ENST00000505816 425 ntBASIC3.96□□□□□ -1.78
RHBDL3P58872 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.96□□□□□ -1.78
RHBDL3P58872 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.96□□□□□ -1.78
RHBDL3P58872 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.96□□□□□ -1.78
RHBDL3P58872 SCARNA13-201ENST00000516672 275 ntBASIC3.96□□□□□ -1.78
RHBDL3P58872 SNORA70.19-201ENST00000516717 90 ntBASIC3.96□□□□□ -1.78
RHBDL3P58872 RN7SKP60-201ENST00000516985 239 ntBASIC3.96□□□□□ -1.78
RHBDL3P58872 AP000889.1-201ENST00000530968 660 ntBASIC3.96□□□□□ -1.78
RHBDL3P58872 AC010620.1-201ENST00000601088 1102 ntBASIC3.96□□□□□ -1.78
RHBDL3P58872 AL162713.1-201ENST00000604480 262 ntBASIC3.96□□□□□ -1.78
RHBDL3P58872 AC073657.2-201ENST00000605661 303 ntBASIC3.96□□□□□ -1.78
RHBDL3P58872 AL133173.2-201ENST00000614270 90 ntBASIC3.96□□□□□ -1.78
RHBDL3P58872 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RHBDL3P58872 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RHBDL3P58872 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RHBDL3P58872 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
RHBDL3P58872 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RHBDL3P58872 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.95□□□□□ -1.78
RHBDL3P58872 SNORA20.2-201ENST00000383922 131 ntBASIC3.95□□□□□ -1.78
RHBDL3P58872 HMGN2P30-201ENST00000423237 256 ntBASIC3.95□□□□□ -1.78
RHBDL3P58872 AL353705.1-201ENST00000433468 480 ntBASIC3.95□□□□□ -1.78
RHBDL3P58872 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.95□□□□□ -1.78
RHBDL3P58872 AL714022.1-201ENST00000439897 151 ntBASIC3.95□□□□□ -1.78
RHBDL3P58872 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.95□□□□□ -1.78
RHBDL3P58872 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.95□□□□□ -1.78
RHBDL3P58872 RPL39P36-201ENST00000490784 156 ntBASIC3.95□□□□□ -1.78
RHBDL3P58872 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.95□□□□□ -1.78
RHBDL3P58872 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.95□□□□□ -1.78
RHBDL3P58872 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.95□□□□□ -1.78
RHBDL3P58872 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.95□□□□□ -1.78
RHBDL3P58872 APOOP4-201ENST00000513530 597 ntBASIC3.95□□□□□ -1.78
RHBDL3P58872 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.95□□□□□ -1.78
RHBDL3P58872 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.95□□□□□ -1.78
RHBDL3P58872 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.95□□□□□ -1.78
RHBDL3P58872 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.95□□□□□ -1.78
RHBDL3P58872 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.95□□□□□ -1.78
RHBDL3P58872 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.95□□□□□ -1.78
RHBDL3P58872 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.95□□□□□ -1.78
RHBDL3P58872 AC068135.2-201ENST00000569293 1028 ntBASIC3.95□□□□□ -1.78
RHBDL3P58872 MIR4325-201ENST00000583049 90 ntBASIC3.95□□□□□ -1.78
RHBDL3P58872 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.95□□□□□ -1.78
RHBDL3P58872 AL355598.1-201ENST00000604169 202 ntBASIC3.95□□□□□ -1.78
RHBDL3P58872 AL356321.1-201ENST00000621360 228 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms