Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 MTCO1P35-201ENST00000515270 228 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 RNU2-27P-201ENST00000516185 142 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 RNA5SP315-201ENST00000516340 116 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 RNA5SP312-201ENST00000517068 116 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 RNU6-711P-201ENST00000517255 106 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 MIR4506-201ENST00000584693 77 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 AC098848.2-201ENST00000588023 330 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 AC068790.2-201ENST00000602601 557 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 AL022154.1-201ENST00000604698 785 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 AC006077.1-201ENST00000604746 343 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 AL139286.2-201ENST00000606838 396 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 FP236240.3-201ENST00000623061 327 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 MTND5P42-201ENST00000637720 498 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 MIR30E-201ENST00000362104 92 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 Y_RNA.245-201ENST00000364493 95 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 SNORA14A-201ENST00000364773 135 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 RNU6-108P-201ENST00000365558 107 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 RNU6-805P-201ENST00000365643 106 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 RNU6-641P-201ENST00000384006 107 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 RNU6-213P-201ENST00000384051 104 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 RNU6-74P-201ENST00000384235 107 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 RPS12P24-201ENST00000412619 387 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 NDUFB4P5-201ENST00000415445 361 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 SDCBPP3-201ENST00000419629 891 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 AC099548.1-201ENST00000421443 426 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 ISCA1P1-201ENST00000426679 387 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 AL591419.1-201ENST00000427423 339 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 AL451062.2-201ENST00000427515 271 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 GOT2P5-201ENST00000433995 546 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 GPR143P-201ENST00000434155 205 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 RPS20P5-201ENST00000434808 360 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 AC009969.1-201ENST00000438726 172 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 RPS15AP9-201ENST00000439856 381 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 DDX3P2-201ENST00000446138 111 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 NANOGNBP1-201ENST00000448444 480 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 CECR9-201ENST00000453421 199 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 FABP5P15-201ENST00000453566 214 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 RPL12P25-201ENST00000455592 494 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 RPS4XP2-201ENST00000458402 793 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 snoU13.28-201ENST00000459235 104 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 AL358832.1-201ENST00000497800 389 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 AC091435.1-201ENST00000505442 584 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 MIR2116-201ENST00000517221 80 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 AC068135.2-201ENST00000569293 1028 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 MIR4443-201ENST00000585052 53 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 FTX_3.1-201ENST00000610451 147 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 AC130324.3-201ENST00000614165 542 ntBASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.05□□□□□ -1.92
CHMP1AQ9HD42 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 MIR372-201ENST00000362225 67 ntBASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 RNA5SP42-201ENST00000364278 115 ntBASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 SNORA73.2-201ENST00000364946 201 ntBASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 Y_RNA.367-201ENST00000365544 101 ntBASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 SNORA24.1-201ENST00000384401 135 ntBASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 MIR30B-201ENST00000384850 88 ntBASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 MTCO3P41-201ENST00000414801 328 ntBASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 ZNF863P-201ENST00000426746 417 ntBASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 HSPD1P21-201ENST00000436541 245 ntBASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 MTND4P25-201ENST00000441039 533 ntBASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
CHMP1AQ9HD42 RPL39P36-201ENST00000490784 156 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms