Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC5.33□□□□□ -1.56
USB1Q9BQ65 AL161713.1-201ENST00000555538 145 ntBASIC5.33□□□□□ -1.56
USB1Q9BQ65 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC5.33□□□□□ -1.56
USB1Q9BQ65 AL008718.3-201ENST00000610217 321 ntBASIC5.33□□□□□ -1.56
USB1Q9BQ65 AL137067.2-201ENST00000621202 131 ntBASIC5.33□□□□□ -1.56
USB1Q9BQ65 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
USB1Q9BQ65 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
USB1Q9BQ65 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.33□□□□□ -1.56
USB1Q9BQ65 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.33□□□□□ -1.56
USB1Q9BQ65 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
USB1Q9BQ65 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
USB1Q9BQ65 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
USB1Q9BQ65 AC104260.2-201ENST00000623551 3497 ntBASIC5.32□□□□□ -1.56
USB1Q9BQ65 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
USB1Q9BQ65 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
USB1Q9BQ65 RNU4-17P-201ENST00000365598 141 ntBASIC5.32□□□□□ -1.56
USB1Q9BQ65 RNU6-142P-201ENST00000384019 107 ntBASIC5.32□□□□□ -1.56
USB1Q9BQ65 RNU6-356P-201ENST00000384140 107 ntBASIC5.32□□□□□ -1.56
USB1Q9BQ65 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.32□□□□□ -1.56
USB1Q9BQ65 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.32□□□□□ -1.56
USB1Q9BQ65 CYP4F29P-201ENST00000420685 446 ntBASIC5.32□□□□□ -1.56
USB1Q9BQ65 AC113412.1-201ENST00000425840 504 ntBASIC5.32□□□□□ -1.56
USB1Q9BQ65 BTF3P11-201ENST00000426582 477 ntBASIC5.32□□□□□ -1.56
USB1Q9BQ65 MTND4LP9-201ENST00000427694 174 ntBASIC5.32□□□□□ -1.56
USB1Q9BQ65 RPL12P16-201ENST00000431098 498 ntBASIC5.32□□□□□ -1.56
USB1Q9BQ65 CR769767.1-201ENST00000436337 346 ntBASIC5.32□□□□□ -1.56
USB1Q9BQ65 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.32□□□□□ -1.56
USB1Q9BQ65 RN7SL188P-201ENST00000469842 285 ntBASIC5.32□□□□□ -1.56
USB1Q9BQ65 RPL23AP40-201ENST00000487630 390 ntBASIC5.32□□□□□ -1.56
USB1Q9BQ65 AC020890.1-201ENST00000491837 504 ntBASIC5.32□□□□□ -1.56
USB1Q9BQ65 YWHAEP4-201ENST00000505390 198 ntBASIC5.32□□□□□ -1.56
USB1Q9BQ65 SNORA43.2-201ENST00000516652 128 ntBASIC5.32□□□□□ -1.56
USB1Q9BQ65 RNU6-58P-201ENST00000517143 103 ntBASIC5.32□□□□□ -1.56
USB1Q9BQ65 AP004609.2-201ENST00000532177 190 ntBASIC5.32□□□□□ -1.56
USB1Q9BQ65 MIR3189-201ENST00000578735 73 ntBASIC5.32□□□□□ -1.56
USB1Q9BQ65 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.32□□□□□ -1.56
USB1Q9BQ65 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.32□□□□□ -1.56
USB1Q9BQ65 AC011487.3-201ENST00000593607 453 ntBASIC5.32□□□□□ -1.56
USB1Q9BQ65 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.32□□□□□ -1.56
USB1Q9BQ65 AL138963.2-201ENST00000605137 226 ntBASIC5.32□□□□□ -1.56
USB1Q9BQ65 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.32□□□□□ -1.56
USB1Q9BQ65 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.32□□□□□ -1.56
USB1Q9BQ65 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
USB1Q9BQ65 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.32□□□□□ -1.56
USB1Q9BQ65 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
USB1Q9BQ65 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
USB1Q9BQ65 AL365440.1-201ENST00000436135 2167 ntBASIC5.32□□□□□ -1.56
USB1Q9BQ65 AL359693.1-201ENST00000614959 2407 ntBASIC5.32□□□□□ -1.56
USB1Q9BQ65 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
USB1Q9BQ65 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
USB1Q9BQ65 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
USB1Q9BQ65 AC083899.1-201ENST00000454465 3819 ntBASIC5.31□□□□□ -1.56
USB1Q9BQ65 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
USB1Q9BQ65 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
USB1Q9BQ65 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.31□□□□□ -1.56
USB1Q9BQ65 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
USB1Q9BQ65 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
USB1Q9BQ65 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
USB1Q9BQ65 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.31□□□□□ -1.56
USB1Q9BQ65 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
USB1Q9BQ65 RNA5SP110-201ENST00000362638 115 ntBASIC5.31□□□□□ -1.56
USB1Q9BQ65 SNORA72.2-201ENST00000365028 127 ntBASIC5.31□□□□□ -1.56
USB1Q9BQ65 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
USB1Q9BQ65 RPS3AP2-201ENST00000407190 754 ntBASIC5.31□□□□□ -1.56
USB1Q9BQ65 RNA5SP296-201ENST00000410523 111 ntBASIC5.31□□□□□ -1.56
USB1Q9BQ65 RNU2-68P-201ENST00000410878 191 ntBASIC5.31□□□□□ -1.56
USB1Q9BQ65 AL096829.1-201ENST00000413677 457 ntBASIC5.31□□□□□ -1.56
USB1Q9BQ65 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC5.31□□□□□ -1.56
USB1Q9BQ65 RPS15AP5-201ENST00000436276 388 ntBASIC5.31□□□□□ -1.56
USB1Q9BQ65 AC243964.1-201ENST00000441814 261 ntBASIC5.31□□□□□ -1.56
USB1Q9BQ65 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.31□□□□□ -1.56
USB1Q9BQ65 AC006026.2-201ENST00000457376 180 ntBASIC5.31□□□□□ -1.56
USB1Q9BQ65 SNRPCP2-201ENST00000504370 475 ntBASIC5.31□□□□□ -1.56
USB1Q9BQ65 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.31□□□□□ -1.56
USB1Q9BQ65 AC107016.1-201ENST00000550463 337 ntBASIC5.31□□□□□ -1.56
USB1Q9BQ65 MIR3145-201ENST00000580727 82 ntBASIC5.31□□□□□ -1.56
USB1Q9BQ65 AC027229.1-201ENST00000583887 253 ntBASIC5.31□□□□□ -1.56
USB1Q9BQ65 AC048347.1-201ENST00000624621 427 ntBASIC5.31□□□□□ -1.56
USB1Q9BQ65 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
USB1Q9BQ65 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.31□□□□□ -1.56
USB1Q9BQ65 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.31□□□□□ -1.56
USB1Q9BQ65 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
USB1Q9BQ65 AC099654.2-201ENST00000433031 1980 ntBASIC5.31□□□□□ -1.56
USB1Q9BQ65 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
USB1Q9BQ65 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.31□□□□□ -1.56
USB1Q9BQ65 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
USB1Q9BQ65 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
USB1Q9BQ65 AC026523.2-201ENST00000625039 7739 ntBASIC5.3□□□□□ -1.56
USB1Q9BQ65 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
USB1Q9BQ65 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.3□□□□□ -1.56
USB1Q9BQ65 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
USB1Q9BQ65 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
USB1Q9BQ65 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.3□□□□□ -1.56
USB1Q9BQ65 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.3□□□□□ -1.56
USB1Q9BQ65 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
USB1Q9BQ65 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
USB1Q9BQ65 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.3□□□□□ -1.56
USB1Q9BQ65 RNU6-1272P-201ENST00000362776 107 ntBASIC5.3□□□□□ -1.56
USB1Q9BQ65 RNU5B-2P-201ENST00000363036 113 ntBASIC5.3□□□□□ -1.56
USB1Q9BQ65 RPL23AP17-201ENST00000401064 499 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms