Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
PKP2Q99959 RNU6-1027P-201ENST00000383998 107 ntBASIC3.11□□□□□ -1.91
PKP2Q99959 RNU6-769P-201ENST00000384407 104 ntBASIC3.11□□□□□ -1.91
PKP2Q99959 MIR183-201ENST00000384958 110 ntBASIC3.11□□□□□ -1.91
PKP2Q99959 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
PKP2Q99959 AL356421.1-201ENST00000403255 413 ntBASIC3.11□□□□□ -1.91
PKP2Q99959 AC018630.2-202ENST00000422992 927 ntBASIC3.11□□□□□ -1.91
PKP2Q99959 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.11□□□□□ -1.91
PKP2Q99959 DPPA2P1-201ENST00000428060 556 ntBASIC3.11□□□□□ -1.91
PKP2Q99959 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.11□□□□□ -1.91
PKP2Q99959 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.11□□□□□ -1.91
PKP2Q99959 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.11□□□□□ -1.91
PKP2Q99959 RSU1P2-202ENST00000437884 485 ntBASIC3.11□□□□□ -1.91
PKP2Q99959 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.11□□□□□ -1.91
PKP2Q99959 AC009237.8-201ENST00000445492 379 ntBASIC3.11□□□□□ -1.91
PKP2Q99959 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.11□□□□□ -1.91
PKP2Q99959 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.11□□□□□ -1.91
PKP2Q99959 UQCRHP3-201ENST00000451503 251 ntBASIC3.11□□□□□ -1.91
PKP2Q99959 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.11□□□□□ -1.91
PKP2Q99959 AL049874.1-201ENST00000489560 388 ntBASIC3.11□□□□□ -1.91
PKP2Q99959 HMGN1P11-201ENST00000508668 303 ntBASIC3.11□□□□□ -1.91
PKP2Q99959 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.11□□□□□ -1.91
PKP2Q99959 AC034159.1-201ENST00000513885 583 ntBASIC3.11□□□□□ -1.91
PKP2Q99959 RNU1-103P-201ENST00000516502 125 ntBASIC3.11□□□□□ -1.91
PKP2Q99959 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.11□□□□□ -1.91
PKP2Q99959 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.11□□□□□ -1.91
PKP2Q99959 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.11□□□□□ -1.91
PKP2Q99959 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.11□□□□□ -1.91
PKP2Q99959 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.11□□□□□ -1.91
PKP2Q99959 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.11□□□□□ -1.91
PKP2Q99959 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.11□□□□□ -1.91
PKP2Q99959 AC091903.1-201ENST00000624322 454 ntBASIC3.11□□□□□ -1.91
PKP2Q99959 U6.105-201ENST00000637379 88 ntBASIC3.11□□□□□ -1.91
PKP2Q99959 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.11□□□□□ -1.91
PKP2Q99959 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PKP2Q99959 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PKP2Q99959 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PKP2Q99959 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PKP2Q99959 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.1□□□□□ -1.91
PKP2Q99959 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.1□□□□□ -1.91
PKP2Q99959 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.1□□□□□ -1.91
PKP2Q99959 Y_RNA.6-201ENST00000362350 114 ntBASIC3.1□□□□□ -1.91
PKP2Q99959 RNU6-1042P-201ENST00000384204 107 ntBASIC3.1□□□□□ -1.91
PKP2Q99959 RNVU1-14-201ENST00000384770 164 ntBASIC3.1□□□□□ -1.91
PKP2Q99959 SNORA40.3-201ENST00000390964 122 ntBASIC3.1□□□□□ -1.91
PKP2Q99959 RNU6-248P-201ENST00000410720 107 ntBASIC3.1□□□□□ -1.91
PKP2Q99959 AC245054.2-201ENST00000415639 319 ntBASIC3.1□□□□□ -1.91
PKP2Q99959 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PKP2Q99959 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.1□□□□□ -1.91
PKP2Q99959 NDUFB4P7-201ENST00000423198 363 ntBASIC3.1□□□□□ -1.91
PKP2Q99959 AC104651.1-201ENST00000427559 735 ntBASIC3.1□□□□□ -1.91
PKP2Q99959 RPL7L1P10-201ENST00000427790 463 ntBASIC3.1□□□□□ -1.91
PKP2Q99959 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.1□□□□□ -1.91
PKP2Q99959 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.1□□□□□ -1.91
PKP2Q99959 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.1□□□□□ -1.91
PKP2Q99959 USP9YP12-201ENST00000450481 570 ntBASIC3.1□□□□□ -1.91
PKP2Q99959 MTND1P9-201ENST00000453775 944 ntBASIC3.1□□□□□ -1.91
PKP2Q99959 AC093899.1-201ENST00000457984 376 ntBASIC3.1□□□□□ -1.91
PKP2Q99959 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.1□□□□□ -1.91
PKP2Q99959 RPL9P33-201ENST00000484311 566 ntBASIC3.1□□□□□ -1.91
PKP2Q99959 LARP1BP2-201ENST00000486594 519 ntBASIC3.1□□□□□ -1.91
PKP2Q99959 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
PKP2Q99959 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
PKP2Q99959 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.1□□□□□ -1.91
PKP2Q99959 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.1□□□□□ -1.91
PKP2Q99959 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.1□□□□□ -1.91
PKP2Q99959 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.1□□□□□ -1.91
PKP2Q99959 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.1□□□□□ -1.91
PKP2Q99959 AC005476.1-201ENST00000554427 397 ntBASIC3.1□□□□□ -1.91
PKP2Q99959 OR4H12P-201ENST00000556269 907 ntBASIC3.1□□□□□ -1.91
PKP2Q99959 ZNF519P3-201ENST00000557158 1032 ntBASIC3.1□□□□□ -1.91
PKP2Q99959 AC009063.1-201ENST00000563342 702 ntBASIC3.1□□□□□ -1.91
PKP2Q99959 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.1□□□□□ -1.91
PKP2Q99959 NUTF2P8-201ENST00000604593 363 ntBASIC3.1□□□□□ -1.91
PKP2Q99959 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.1□□□□□ -1.91
PKP2Q99959 AC108747.1-201ENST00000609508 535 ntBASIC3.1□□□□□ -1.91
PKP2Q99959 AL591516.1-201ENST00000611326 274 ntBASIC3.1□□□□□ -1.91
PKP2Q99959 uc_338.1-201ENST00000612113 180 ntBASIC3.1□□□□□ -1.91
PKP2Q99959 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.1□□□□□ -1.91
PKP2Q99959 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.1□□□□□ -1.91
PKP2Q99959 SNORD39.4-201ENST00000620099 78 ntBASIC3.1□□□□□ -1.91
PKP2Q99959 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PKP2Q99959 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.1□□□□□ -1.91
PKP2Q99959 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.1□□□□□ -1.91
PKP2Q99959 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.1□□□□□ -1.91
PKP2Q99959 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.1□□□□□ -1.91
PKP2Q99959 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PKP2Q99959 SDAD1P2-201ENST00000441308 2028 ntBASIC3.1□□□□□ -1.91
PKP2Q99959 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PKP2Q99959 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
PKP2Q99959 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PKP2Q99959 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
PKP2Q99959 RNU1-70P-201ENST00000362618 164 ntBASIC3.09□□□□□ -1.91
PKP2Q99959 DYNLT3P1-201ENST00000378574 347 ntBASIC3.09□□□□□ -1.91
PKP2Q99959 RNU6-637P-201ENST00000384050 107 ntBASIC3.09□□□□□ -1.91
PKP2Q99959 RNU6-809P-201ENST00000384461 107 ntBASIC3.09□□□□□ -1.91
PKP2Q99959 MIR514A1-201ENST00000385133 98 ntBASIC3.09□□□□□ -1.91
PKP2Q99959 RPL21P17-201ENST00000397467 475 ntBASIC3.09□□□□□ -1.91
PKP2Q99959 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.09□□□□□ -1.91
PKP2Q99959 Y_RNA.598-201ENST00000410480 95 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms