Protein–RNA interactions for Protein: Q96Q15

SMG1, Serine/threonine-protein kinase SMG1, humanhuman

Known RBP Predictions only

Length 3,661 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1Q96Q15 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.82□□□□□ -2.28
SMG1Q96Q15 AC010625.1-201ENST00000511296 403 ntBASIC0.82□□□□□ -2.28
SMG1Q96Q15 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.82□□□□□ -2.28
SMG1Q96Q15 AP001180.3-201ENST00000582221 145 ntBASIC0.82□□□□□ -2.28
SMG1Q96Q15 SNORD114-21-201ENST00000606412 72 ntBASIC0.82□□□□□ -2.28
SMG1Q96Q15 AL161722.3-201ENST00000605789 2983 ntBASIC0.82□□□□□ -2.28
SMG1Q96Q15 SNORA6-201ENST00000384033 151 ntBASIC0.82□□□□□ -2.28
SMG1Q96Q15 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.82□□□□□ -2.28
SMG1Q96Q15 RPL21P90-201ENST00000415692 466 ntBASIC0.82□□□□□ -2.28
SMG1Q96Q15 AP000254.1-201ENST00000609934 520 ntBASIC0.82□□□□□ -2.28
SMG1Q96Q15 AC080100.1-201ENST00000624239 5356 ntBASIC0.82□□□□□ -2.28
SMG1Q96Q15 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.82□□□□□ -2.28
SMG1Q96Q15 RNU1-109P-201ENST00000383960 147 ntBASIC0.82□□□□□ -2.28
SMG1Q96Q15 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC0.82□□□□□ -2.28
SMG1Q96Q15 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.82□□□□□ -2.28
SMG1Q96Q15 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.82□□□□□ -2.28
SMG1Q96Q15 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.82□□□□□ -2.28
SMG1Q96Q15 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.82□□□□□ -2.28
SMG1Q96Q15 Xist_exon1.1-201ENST00000618930 85 ntBASIC0.82□□□□□ -2.28
SMG1Q96Q15 OR5AQ1P-203ENST00000641818 1529 ntBASIC0.81□□□□□ -2.28
SMG1Q96Q15 HMGB3P31-201ENST00000413333 595 ntBASIC0.81□□□□□ -2.28
SMG1Q96Q15 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC0.81□□□□□ -2.28
SMG1Q96Q15 MRPS33P3-201ENST00000513456 322 ntBASIC0.81□□□□□ -2.28
SMG1Q96Q15 AL391261.3-201ENST00000557194 520 ntBASIC0.81□□□□□ -2.28
SMG1Q96Q15 AC005156.1-201ENST00000613371 573 ntBASIC0.81□□□□□ -2.28
SMG1Q96Q15 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
SMG1Q96Q15 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC0.81□□□□□ -2.28
SMG1Q96Q15 RNU6-234P-201ENST00000365229 104 ntBASIC0.81□□□□□ -2.28
SMG1Q96Q15 BOLA3P3-201ENST00000505182 232 ntBASIC0.81□□□□□ -2.28
SMG1Q96Q15 RNU6ATAC39P-201ENST00000516309 149 ntBASIC0.81□□□□□ -2.28
SMG1Q96Q15 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC0.81□□□□□ -2.28
SMG1Q96Q15 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC0.81□□□□□ -2.28
SMG1Q96Q15 RNA5SP499-201ENST00000363982 119 ntBASIC0.8□□□□□ -2.28
SMG1Q96Q15 RNU6-178P-201ENST00000384631 104 ntBASIC0.8□□□□□ -2.28
SMG1Q96Q15 OR6C66P-201ENST00000414917 930 ntBASIC0.8□□□□□ -2.28
SMG1Q96Q15 Z75741.2-201ENST00000417272 1167 ntBASIC0.8□□□□□ -2.28
SMG1Q96Q15 MIR4636-201ENST00000582271 80 ntBASIC0.8□□□□□ -2.28
SMG1Q96Q15 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.8□□□□□ -2.28
SMG1Q96Q15 FAM71BP1-201ENST00000604431 523 ntBASIC0.8□□□□□ -2.28
SMG1Q96Q15 MIR329-2-201ENST00000385029 84 ntBASIC0.8□□□□□ -2.28
SMG1Q96Q15 ARF4P4-201ENST00000439608 520 ntBASIC0.8□□□□□ -2.28
SMG1Q96Q15 RPS23P3-201ENST00000470993 430 ntBASIC0.8□□□□□ -2.28
SMG1Q96Q15 AC114322.1-201ENST00000506771 926 ntBASIC0.8□□□□□ -2.28
SMG1Q96Q15 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.8□□□□□ -2.28
SMG1Q96Q15 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC0.8□□□□□ -2.28
SMG1Q96Q15 AL500527.1-201ENST00000448532 255 ntBASIC0.8□□□□□ -2.28
SMG1Q96Q15 HMGN1P10-201ENST00000474557 553 ntBASIC0.8□□□□□ -2.28
SMG1Q96Q15 MIR5589-201ENST00000579442 60 ntBASIC0.8□□□□□ -2.28
SMG1Q96Q15 MIR6835-201ENST00000621552 64 ntBASIC0.8□□□□□ -2.28
SMG1Q96Q15 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC0.79□□□□□ -2.28
SMG1Q96Q15 OR4R1P-201ENST00000529879 463 ntBASIC0.79□□□□□ -2.28
SMG1Q96Q15 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.79□□□□□ -2.28
SMG1Q96Q15 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC0.79□□□□□ -2.28
SMG1Q96Q15 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
SMG1Q96Q15 HSPE1P26-201ENST00000405341 275 ntBASIC0.79□□□□□ -2.28
SMG1Q96Q15 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC0.79□□□□□ -2.28
SMG1Q96Q15 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC0.79□□□□□ -2.28
SMG1Q96Q15 AC012443.1-201ENST00000605605 231 ntBASIC0.79□□□□□ -2.28
SMG1Q96Q15 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
SMG1Q96Q15 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
SMG1Q96Q15 SNORA2A-201ENST00000383885 135 ntBASIC0.79□□□□□ -2.28
SMG1Q96Q15 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC0.79□□□□□ -2.28
SMG1Q96Q15 RNU1-104P-201ENST00000517280 175 ntBASIC0.79□□□□□ -2.28
SMG1Q96Q15 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC0.79□□□□□ -2.28
SMG1Q96Q15 HSPE1P14-201ENST00000605812 302 ntBASIC0.79□□□□□ -2.28
SMG1Q96Q15 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
SMG1Q96Q15 MIR1265-201ENST00000408444 86 ntBASIC0.78□□□□□ -2.28
SMG1Q96Q15 BX682237.1-201ENST00000415016 335 ntBASIC0.78□□□□□ -2.28
SMG1Q96Q15 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC0.78□□□□□ -2.28
SMG1Q96Q15 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC0.78□□□□□ -2.28
SMG1Q96Q15 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC0.78□□□□□ -2.28
SMG1Q96Q15 AC011468.4-201ENST00000603942 409 ntBASIC0.78□□□□□ -2.28
SMG1Q96Q15 AC004943.3-201ENST00000624116 600 ntBASIC0.78□□□□□ -2.28
SMG1Q96Q15 MIR203B-201ENST00000636080 86 ntBASIC0.78□□□□□ -2.28
SMG1Q96Q15 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.78□□□□□ -2.28
SMG1Q96Q15 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.78□□□□□ -2.28
SMG1Q96Q15 RNU6-418P-201ENST00000384035 107 ntBASIC0.78□□□□□ -2.28
SMG1Q96Q15 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
SMG1Q96Q15 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.78□□□□□ -2.28
SMG1Q96Q15 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC0.78□□□□□ -2.28
SMG1Q96Q15 AC112503.2-201ENST00000609005 552 ntBASIC0.78□□□□□ -2.28
SMG1Q96Q15 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC0.78□□□□□ -2.28
SMG1Q96Q15 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.78□□□□□ -2.28
SMG1Q96Q15 Y_RNA.324-201ENST00000365165 102 ntBASIC0.78□□□□□ -2.29
SMG1Q96Q15 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.78□□□□□ -2.29
SMG1Q96Q15 AC008379.1-201ENST00000463655 464 ntBASIC0.78□□□□□ -2.29
SMG1Q96Q15 AC005908.1-201ENST00000468701 347 ntBASIC0.78□□□□□ -2.29
SMG1Q96Q15 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC0.78□□□□□ -2.29
SMG1Q96Q15 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.78□□□□□ -2.29
SMG1Q96Q15 RNU1-62P-201ENST00000362599 164 ntBASIC0.77□□□□□ -2.29
SMG1Q96Q15 Y_RNA.488-201ENST00000384403 102 ntBASIC0.77□□□□□ -2.29
SMG1Q96Q15 AC121161.1-201ENST00000510606 652 ntBASIC0.77□□□□□ -2.29
SMG1Q96Q15 AC090897.2-201ENST00000581715 130 ntBASIC0.77□□□□□ -2.29
SMG1Q96Q15 FAM157A-202ENST00000615155 405 ntBASIC0.77□□□□□ -2.29
SMG1Q96Q15 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SMG1Q96Q15 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC0.77□□□□□ -2.29
SMG1Q96Q15 RNU6-173P-201ENST00000364215 104 ntBASIC0.77□□□□□ -2.29
SMG1Q96Q15 RPL23AP32-201ENST00000395315 459 ntBASIC0.77□□□□□ -2.29
SMG1Q96Q15 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC0.77□□□□□ -2.29
SMG1Q96Q15 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms