Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AL139395.1-201ENST00000603662 160 ntBASIC5.87□□□□□ -1.47
LRCH3Q96II8 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.87□□□□□ -1.47
LRCH3Q96II8 AL591926.4-201ENST00000616895 298 ntBASIC5.87□□□□□ -1.47
LRCH3Q96II8 MIR3658-201ENST00000636291 56 ntBASIC5.87□□□□□ -1.47
LRCH3Q96II8 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LRCH3Q96II8 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LRCH3Q96II8 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
LRCH3Q96II8 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.86□□□□□ -1.47
LRCH3Q96II8 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LRCH3Q96II8 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LRCH3Q96II8 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LRCH3Q96II8 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LRCH3Q96II8 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
LRCH3Q96II8 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LRCH3Q96II8 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
LRCH3Q96II8 UBE2L2-201ENST00000254302 429 ntBASIC5.86□□□□□ -1.47
LRCH3Q96II8 SNORD1C-201ENST00000363315 78 ntBASIC5.86□□□□□ -1.47
LRCH3Q96II8 RNU6-961P-201ENST00000363893 105 ntBASIC5.86□□□□□ -1.47
LRCH3Q96II8 Y_RNA.230-201ENST00000364348 109 ntBASIC5.86□□□□□ -1.47
LRCH3Q96II8 MIR130A-201ENST00000385274 89 ntBASIC5.86□□□□□ -1.47
LRCH3Q96II8 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.86□□□□□ -1.47
LRCH3Q96II8 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.86□□□□□ -1.47
LRCH3Q96II8 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.86□□□□□ -1.47
LRCH3Q96II8 RFPL4AP5-201ENST00000514977 504 ntBASIC5.86□□□□□ -1.47
LRCH3Q96II8 IGLV3-24-201ENST00000517477 197 ntBASIC5.86□□□□□ -1.47
LRCH3Q96II8 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.86□□□□□ -1.47
LRCH3Q96II8 AC008489.1-201ENST00000524271 483 ntBASIC5.86□□□□□ -1.47
LRCH3Q96II8 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.86□□□□□ -1.47
LRCH3Q96II8 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.86□□□□□ -1.47
LRCH3Q96II8 MIR4277-201ENST00000578298 84 ntBASIC5.86□□□□□ -1.47
LRCH3Q96II8 MIR4420-201ENST00000583944 77 ntBASIC5.86□□□□□ -1.47
LRCH3Q96II8 DNAJC19P2-201ENST00000593340 302 ntBASIC5.86□□□□□ -1.47
LRCH3Q96II8 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.86□□□□□ -1.47
LRCH3Q96II8 SCARNA4-201ENST00000629045 128 ntBASIC5.86□□□□□ -1.47
LRCH3Q96II8 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.86□□□□□ -1.47
LRCH3Q96II8 LINC01109-201ENST00000603837 3081 ntBASIC5.86□□□□□ -1.47
LRCH3Q96II8 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LRCH3Q96II8 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LRCH3Q96II8 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC5.86□□□□□ -1.47
LRCH3Q96II8 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LRCH3Q96II8 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.85□□□□□ -1.47
LRCH3Q96II8 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.85□□□□□ -1.47
LRCH3Q96II8 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.85□□□□□ -1.47
LRCH3Q96II8 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
LRCH3Q96II8 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
LRCH3Q96II8 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
LRCH3Q96II8 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LRCH3Q96II8 ZNF204P-201ENST00000416749 2397 ntBASIC5.85□□□□□ -1.47
LRCH3Q96II8 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.85□□□□□ -1.47
LRCH3Q96II8 RNA5SP52-201ENST00000362448 134 ntBASIC5.85□□□□□ -1.47
LRCH3Q96II8 RNU6-899P-201ENST00000363947 107 ntBASIC5.85□□□□□ -1.47
LRCH3Q96II8 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LRCH3Q96II8 UBA52P6-201ENST00000399822 382 ntBASIC5.85□□□□□ -1.47
LRCH3Q96II8 ELOCP19-201ENST00000411919 318 ntBASIC5.85□□□□□ -1.47
LRCH3Q96II8 COX6B1P7-201ENST00000430845 235 ntBASIC5.85□□□□□ -1.47
LRCH3Q96II8 GSTM5P1-201ENST00000434751 660 ntBASIC5.85□□□□□ -1.47
LRCH3Q96II8 RPL23AP58-201ENST00000440453 469 ntBASIC5.85□□□□□ -1.47
LRCH3Q96II8 RNU6-1114P-201ENST00000516022 107 ntBASIC5.85□□□□□ -1.47
LRCH3Q96II8 RN7SKP49-201ENST00000516675 260 ntBASIC5.85□□□□□ -1.47
LRCH3Q96II8 AP004242.1-201ENST00000533701 349 ntBASIC5.85□□□□□ -1.47
LRCH3Q96II8 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.85□□□□□ -1.47
LRCH3Q96II8 MIR4429-201ENST00000580105 73 ntBASIC5.85□□□□□ -1.47
LRCH3Q96II8 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.85□□□□□ -1.47
LRCH3Q96II8 AL355812.1-201ENST00000603215 216 ntBASIC5.85□□□□□ -1.47
LRCH3Q96II8 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.85□□□□□ -1.47
LRCH3Q96II8 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.85□□□□□ -1.47
LRCH3Q96II8 MIR4275-201ENST00000636486 87 ntBASIC5.85□□□□□ -1.47
LRCH3Q96II8 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.85□□□□□ -1.47
LRCH3Q96II8 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LRCH3Q96II8 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LRCH3Q96II8 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
LRCH3Q96II8 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.85□□□□□ -1.47
LRCH3Q96II8 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LRCH3Q96II8 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
LRCH3Q96II8 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
LRCH3Q96II8 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LRCH3Q96II8 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LRCH3Q96II8 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LRCH3Q96II8 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.47
LRCH3Q96II8 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.84□□□□□ -1.47
LRCH3Q96II8 THAP12P9-201ENST00000503971 2360 ntBASIC5.84□□□□□ -1.47
LRCH3Q96II8 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LRCH3Q96II8 SNORD14B-201ENST00000364533 90 ntBASIC5.84□□□□□ -1.47
LRCH3Q96II8 RNU6-741P-201ENST00000383889 107 ntBASIC5.84□□□□□ -1.47
LRCH3Q96II8 MIR301A-201ENST00000385261 86 ntBASIC5.84□□□□□ -1.47
LRCH3Q96II8 MT-TC-201ENST00000387405 66 ntBASIC5.84□□□□□ -1.47
LRCH3Q96II8 RPL7AP25-201ENST00000423357 805 ntBASIC5.84□□□□□ -1.47
LRCH3Q96II8 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.84□□□□□ -1.47
LRCH3Q96II8 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC5.84□□□□□ -1.47
LRCH3Q96II8 FHP1-201ENST00000442741 703 ntBASIC5.84□□□□□ -1.47
LRCH3Q96II8 MRPL48P1-201ENST00000445390 636 ntBASIC5.84□□□□□ -1.47
LRCH3Q96II8 AL162739.1-201ENST00000450606 307 ntBASIC5.84□□□□□ -1.47
LRCH3Q96II8 RNU1-88P-201ENST00000459274 128 ntBASIC5.84□□□□□ -1.47
LRCH3Q96II8 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC5.84□□□□□ -1.47
LRCH3Q96II8 TOMM22P4-201ENST00000511318 336 ntBASIC5.84□□□□□ -1.47
LRCH3Q96II8 MIR4691-201ENST00000583764 85 ntBASIC5.84□□□□□ -1.47
LRCH3Q96II8 AC000095.2-202ENST00000637415 154 ntBASIC5.84□□□□□ -1.47
LRCH3Q96II8 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
LRCH3Q96II8 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.84□□□□□ -1.47
LRCH3Q96II8 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms