Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL670379.1-201ENST00000604752 252 ntBASIC3.21□□□□□ -1.9
CLDN20P56880 AL670379.5-201ENST00000605253 252 ntBASIC3.21□□□□□ -1.9
CLDN20P56880 AL670379.12-201ENST00000605291 253 ntBASIC3.21□□□□□ -1.9
CLDN20P56880 AL670379.8-201ENST00000605353 252 ntBASIC3.21□□□□□ -1.9
CLDN20P56880 AL670379.7-201ENST00000605823 252 ntBASIC3.21□□□□□ -1.9
CLDN20P56880 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.21□□□□□ -1.9
CLDN20P56880 MIR6075-201ENST00000620782 95 ntBASIC3.21□□□□□ -1.9
CLDN20P56880 U4.6-201ENST00000621618 127 ntBASIC3.21□□□□□ -1.9
CLDN20P56880 AL357559.1-201ENST00000622228 274 ntBASIC3.21□□□□□ -1.9
CLDN20P56880 AC009161.2-201ENST00000624626 138 ntBASIC3.21□□□□□ -1.9
CLDN20P56880 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLDN20P56880 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CLDN20P56880 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.21□□□□□ -1.9
CLDN20P56880 AL021368.2-201ENST00000606125 5352 ntBASIC3.21□□□□□ -1.9
CLDN20P56880 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLDN20P56880 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.21□□□□□ -1.9
CLDN20P56880 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLDN20P56880 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLDN20P56880 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CLDN20P56880 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CLDN20P56880 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLDN20P56880 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.2□□□□□ -1.9
CLDN20P56880 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.2□□□□□ -1.9
CLDN20P56880 AC073343.1-201ENST00000328239 651 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 RNA5SP119-201ENST00000362715 117 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 RNU6-960P-201ENST00000364056 120 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 DEFB109C-201ENST00000382575 264 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 DEFB109B-201ENST00000382656 264 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 MIR218-2-201ENST00000385006 110 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 MIR181A1-201ENST00000385026 110 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 MIR514A1-201ENST00000385133 98 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 MTCO3P40-201ENST00000392516 676 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CLDN20P56880 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.2□□□□□ -1.9
CLDN20P56880 AC093578.1-201ENST00000415219 368 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.2□□□□□ -1.9
CLDN20P56880 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.2□□□□□ -1.9
CLDN20P56880 MTCO2P19-201ENST00000427513 598 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 DPPA2P1-201ENST00000428060 556 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 TIMM9P3-201ENST00000428659 274 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 HMGB1P12-201ENST00000438594 598 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.2□□□□□ -1.9
CLDN20P56880 RPL21P23-201ENST00000446654 460 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 AL358232.1-201ENST00000448030 501 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 AC022364.2-201ENST00000457963 554 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 RPS20P20-201ENST00000460498 340 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 AC078785.3-201ENST00000476607 425 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 AC126182.1-201ENST00000478134 357 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.2□□□□□ -1.9
CLDN20P56880 RPS4XP13-201ENST00000483219 789 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 RPS3AP14-201ENST00000483907 780 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 AC079382.1-201ENST00000493346 557 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.2□□□□□ -1.9
CLDN20P56880 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.2□□□□□ -1.9
CLDN20P56880 SNORA70.16-201ENST00000516390 95 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 RNU6-1092P-201ENST00000516955 87 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 MTND1P5-201ENST00000517906 940 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.2□□□□□ -1.9
CLDN20P56880 HMGB1P41-201ENST00000520234 440 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 AP001893.2-201ENST00000526949 202 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.2□□□□□ -1.9
CLDN20P56880 AC004024.1-201ENST00000549244 247 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 AC124947.2-202ENST00000552735 133 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 RPS3AP4-201ENST00000555161 764 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 AC136619.2-201ENST00000563361 631 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 TPRKBP2-201ENST00000565969 475 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 AC055876.1-202ENST00000567053 138 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.2□□□□□ -1.9
CLDN20P56880 AP001029.3-201ENST00000588063 596 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.2□□□□□ -1.9
CLDN20P56880 AL391646.1-201ENST00000603860 190 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 U3.45-201ENST00000607547 219 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 AL359880.1-201ENST00000621879 266 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 CR381653.2-201ENST00000624041 768 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 SEPT14P19-203ENST00000633205 211 ntBASIC3.2□□□□□ -1.9
CLDN20P56880 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLDN20P56880 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.19□□□□□ -1.9
CLDN20P56880 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CLDN20P56880 Y_RNA.22-201ENST00000362492 102 ntBASIC3.19□□□□□ -1.9
CLDN20P56880 RNA5SP42-201ENST00000364278 115 ntBASIC3.19□□□□□ -1.9
CLDN20P56880 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDN20P56880 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDN20P56880 RAC1P6-201ENST00000423911 575 ntBASIC3.19□□□□□ -1.9
CLDN20P56880 ISCA1P1-201ENST00000426679 387 ntBASIC3.19□□□□□ -1.9
CLDN20P56880 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDN20P56880 AP000907.1-201ENST00000428428 510 ntBASIC3.19□□□□□ -1.9
CLDN20P56880 YME1L1P1-201ENST00000429435 297 ntBASIC3.19□□□□□ -1.9
CLDN20P56880 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.19□□□□□ -1.9
CLDN20P56880 RPL23AP30-201ENST00000432419 501 ntBASIC3.19□□□□□ -1.9
CLDN20P56880 RPS20P5-201ENST00000434808 360 ntBASIC3.19□□□□□ -1.9
CLDN20P56880 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDN20P56880 HMGB3P12-201ENST00000438745 556 ntBASIC3.19□□□□□ -1.9
CLDN20P56880 AC020550.1-201ENST00000447385 163 ntBASIC3.19□□□□□ -1.9
CLDN20P56880 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDN20P56880 MTND2P24-201ENST00000453434 806 ntBASIC3.19□□□□□ -1.9
CLDN20P56880 AP002884.2-201ENST00000471647 395 ntBASIC3.19□□□□□ -1.9
CLDN20P56880 AL049874.1-201ENST00000489560 388 ntBASIC3.19□□□□□ -1.9
CLDN20P56880 SCARNA15.2-201ENST00000516409 127 ntBASIC3.19□□□□□ -1.9
CLDN20P56880 RNU6-314P-201ENST00000516574 104 ntBASIC3.19□□□□□ -1.9
CLDN20P56880 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms