Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 YPEL5P1-201ENST00000419731 367 ntBASIC3.17□□□□□ -1.9
APOBEC1P41238 AC069157.1-201ENST00000421749 137 ntBASIC3.17□□□□□ -1.9
APOBEC1P41238 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.17□□□□□ -1.9
APOBEC1P41238 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.17□□□□□ -1.9
APOBEC1P41238 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.17□□□□□ -1.9
APOBEC1P41238 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.17□□□□□ -1.9
APOBEC1P41238 RPS23P3-201ENST00000470993 430 ntBASIC3.17□□□□□ -1.9
APOBEC1P41238 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.17□□□□□ -1.9
APOBEC1P41238 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.17□□□□□ -1.9
APOBEC1P41238 AC026784.1-201ENST00000507986 352 ntBASIC3.17□□□□□ -1.9
APOBEC1P41238 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.17□□□□□ -1.9
APOBEC1P41238 RNU6-1256P-201ENST00000516539 103 ntBASIC3.17□□□□□ -1.9
APOBEC1P41238 SNORA70.18-201ENST00000516696 98 ntBASIC3.17□□□□□ -1.9
APOBEC1P41238 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.17□□□□□ -1.9
APOBEC1P41238 AP006587.4-201ENST00000526053 529 ntBASIC3.17□□□□□ -1.9
APOBEC1P41238 AP003465.2-201ENST00000602571 373 ntBASIC3.17□□□□□ -1.9
APOBEC1P41238 AL109618.2-201ENST00000605527 211 ntBASIC3.17□□□□□ -1.9
APOBEC1P41238 AF250324.2-201ENST00000608299 610 ntBASIC3.17□□□□□ -1.9
APOBEC1P41238 AC017083.3-201ENST00000609955 700 ntBASIC3.17□□□□□ -1.9
APOBEC1P41238 AL110115.1-201ENST00000614396 364 ntBASIC3.17□□□□□ -1.9
APOBEC1P41238 U4.6-201ENST00000621618 127 ntBASIC3.17□□□□□ -1.9
APOBEC1P41238 AC039056.2-201ENST00000622261 511 ntBASIC3.17□□□□□ -1.9
APOBEC1P41238 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.17□□□□□ -1.9
APOBEC1P41238 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.17□□□□□ -1.9
APOBEC1P41238 AC012442.3-202ENST00000636742 206 ntBASIC3.17□□□□□ -1.9
APOBEC1P41238 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
APOBEC1P41238 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
APOBEC1P41238 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
APOBEC1P41238 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.17□□□□□ -1.9
APOBEC1P41238 AC090740.1-201ENST00000623193 2262 ntBASIC3.17□□□□□ -1.9
APOBEC1P41238 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.16□□□□□ -1.9
APOBEC1P41238 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
APOBEC1P41238 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
APOBEC1P41238 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
APOBEC1P41238 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
APOBEC1P41238 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
APOBEC1P41238 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
APOBEC1P41238 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.16□□□□□ -1.9
APOBEC1P41238 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
APOBEC1P41238 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
APOBEC1P41238 Y_RNA.159-201ENST00000363674 87 ntBASIC3.16□□□□□ -1.9
APOBEC1P41238 MIR200C-201ENST00000384980 68 ntBASIC3.16□□□□□ -1.9
APOBEC1P41238 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
APOBEC1P41238 RN7SKP111-201ENST00000410349 271 ntBASIC3.16□□□□□ -1.9
APOBEC1P41238 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.16□□□□□ -1.9
APOBEC1P41238 AC093106.2-201ENST00000428212 385 ntBASIC3.16□□□□□ -1.9
APOBEC1P41238 HMGB1P27-201ENST00000431429 603 ntBASIC3.16□□□□□ -1.9
APOBEC1P41238 MTND1P4-201ENST00000435196 415 ntBASIC3.16□□□□□ -1.9
APOBEC1P41238 HSPD1P21-201ENST00000436541 245 ntBASIC3.16□□□□□ -1.9
APOBEC1P41238 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.16□□□□□ -1.9
APOBEC1P41238 NEFMP1-201ENST00000443423 1006 ntBASIC3.16□□□□□ -1.9
APOBEC1P41238 RPL23AP20-201ENST00000447965 421 ntBASIC3.16□□□□□ -1.9
APOBEC1P41238 U3.44-201ENST00000458938 192 ntBASIC3.16□□□□□ -1.9
APOBEC1P41238 RPL23AP67-201ENST00000465341 474 ntBASIC3.16□□□□□ -1.9
APOBEC1P41238 AC126182.1-201ENST00000478134 357 ntBASIC3.16□□□□□ -1.9
APOBEC1P41238 HSPD1P15-201ENST00000505573 1122 ntBASIC3.16□□□□□ -1.9
APOBEC1P41238 AC116562.3-201ENST00000506136 177 ntBASIC3.16□□□□□ -1.9
APOBEC1P41238 RN7SKP13-201ENST00000515933 244 ntBASIC3.16□□□□□ -1.9
APOBEC1P41238 RNU6-927P-201ENST00000516199 100 ntBASIC3.16□□□□□ -1.9
APOBEC1P41238 AC026403.1-201ENST00000518938 295 ntBASIC3.16□□□□□ -1.9
APOBEC1P41238 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.16□□□□□ -1.9
APOBEC1P41238 AP001646.1-201ENST00000527936 915 ntBASIC3.16□□□□□ -1.9
APOBEC1P41238 AC068587.5-201ENST00000528506 175 ntBASIC3.16□□□□□ -1.9
APOBEC1P41238 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.16□□□□□ -1.9
APOBEC1P41238 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.16□□□□□ -1.9
APOBEC1P41238 SYF2P1-201ENST00000550658 413 ntBASIC3.16□□□□□ -1.9
APOBEC1P41238 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.16□□□□□ -1.9
APOBEC1P41238 TPRKBP2-201ENST00000565969 475 ntBASIC3.16□□□□□ -1.9
APOBEC1P41238 AC034105.4-201ENST00000568304 277 ntBASIC3.16□□□□□ -1.9
APOBEC1P41238 HMGB1P6-201ENST00000569046 646 ntBASIC3.16□□□□□ -1.9
APOBEC1P41238 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.16□□□□□ -1.9
APOBEC1P41238 AC006557.5-201ENST00000603126 811 ntBASIC3.16□□□□□ -1.9
APOBEC1P41238 AC174048.1-201ENST00000603389 144 ntBASIC3.16□□□□□ -1.9
APOBEC1P41238 DPPA3P3-201ENST00000603842 430 ntBASIC3.16□□□□□ -1.9
APOBEC1P41238 AL121992.2-201ENST00000606262 256 ntBASIC3.16□□□□□ -1.9
APOBEC1P41238 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.16□□□□□ -1.9
APOBEC1P41238 RMST_8.1-201ENST00000610287 165 ntBASIC3.16□□□□□ -1.9
APOBEC1P41238 AC005609.4-201ENST00000625071 447 ntBASIC3.16□□□□□ -1.9
APOBEC1P41238 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.16□□□□□ -1.9
APOBEC1P41238 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
APOBEC1P41238 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.16□□□□□ -1.9
APOBEC1P41238 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
APOBEC1P41238 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
APOBEC1P41238 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.15□□□□□ -1.9
APOBEC1P41238 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
APOBEC1P41238 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.15□□□□□ -1.9
APOBEC1P41238 SNORA62.3-201ENST00000365110 153 ntBASIC3.15□□□□□ -1.91
APOBEC1P41238 Y_RNA.367-201ENST00000365544 101 ntBASIC3.15□□□□□ -1.91
APOBEC1P41238 SMIM11P1-201ENST00000369586 178 ntBASIC3.15□□□□□ -1.91
APOBEC1P41238 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
APOBEC1P41238 RNU6-946P-201ENST00000383878 107 ntBASIC3.15□□□□□ -1.91
APOBEC1P41238 Y_RNA.481-201ENST00000384373 102 ntBASIC3.15□□□□□ -1.91
APOBEC1P41238 MIR218-2-201ENST00000385006 110 ntBASIC3.15□□□□□ -1.91
APOBEC1P41238 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
APOBEC1P41238 U3.42-201ENST00000408746 214 ntBASIC3.15□□□□□ -1.91
APOBEC1P41238 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.15□□□□□ -1.91
APOBEC1P41238 UBE2V1P10-201ENST00000414685 269 ntBASIC3.15□□□□□ -1.91
APOBEC1P41238 DBIP2-201ENST00000419076 262 ntBASIC3.15□□□□□ -1.91
APOBEC1P41238 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.15□□□□□ -1.91
APOBEC1P41238 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms