Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AP003122.6-201ENST00000623831 495 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 AC120349.2-201ENST00000625002 298 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 PCMTD1P7-201ENST00000634506 357 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HOXC4P09017 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HOXC4P09017 DDX43P2-201ENST00000604753 1354 ntBASIC2.61□□□□□ -1.99
HOXC4P09017 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.6□□□□□ -1.99
HOXC4P09017 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.6□□□□□ -1.99
HOXC4P09017 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
HOXC4P09017 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
HOXC4P09017 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.6□□□□□ -1.99
HOXC4P09017 RNU6-500P-201ENST00000362349 107 ntBASIC2.6□□□□□ -1.99
HOXC4P09017 RNU6-660P-201ENST00000364566 109 ntBASIC2.6□□□□□ -1.99
HOXC4P09017 RNU1-100P-201ENST00000365255 165 ntBASIC2.6□□□□□ -1.99
HOXC4P09017 RNU6-878P-201ENST00000384578 110 ntBASIC2.6□□□□□ -1.99
HOXC4P09017 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.6□□□□□ -1.99
HOXC4P09017 RNU2-28P-201ENST00000410457 189 ntBASIC2.6□□□□□ -1.99
HOXC4P09017 TPMTP3-201ENST00000411928 735 ntBASIC2.6□□□□□ -1.99
HOXC4P09017 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.6□□□□□ -1.99
HOXC4P09017 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.6□□□□□ -1.99
HOXC4P09017 LARP1BP3-201ENST00000437229 869 ntBASIC2.6□□□□□ -1.99
HOXC4P09017 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.6□□□□□ -1.99
HOXC4P09017 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
HOXC4P09017 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.6□□□□□ -1.99
HOXC4P09017 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.6□□□□□ -1.99
HOXC4P09017 AC009961.3-201ENST00000449832 765 ntBASIC2.6□□□□□ -1.99
HOXC4P09017 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.6□□□□□ -1.99
HOXC4P09017 MTCO2P18-201ENST00000457151 658 ntBASIC2.6□□□□□ -1.99
HOXC4P09017 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.6□□□□□ -1.99
HOXC4P09017 AC013828.1-201ENST00000481845 158 ntBASIC2.6□□□□□ -1.99
HOXC4P09017 AC104685.1-201ENST00000502445 371 ntBASIC2.6□□□□□ -1.99
HOXC4P09017 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HOXC4P09017 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.6□□□□□ -1.99
HOXC4P09017 MTCO3P7-201ENST00000510008 774 ntBASIC2.6□□□□□ -1.99
HOXC4P09017 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.6□□□□□ -1.99
HOXC4P09017 AC025881.1-201ENST00000518851 512 ntBASIC2.6□□□□□ -1.99
HOXC4P09017 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.6□□□□□ -1.99
HOXC4P09017 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.6□□□□□ -1.99
HOXC4P09017 AP003033.1-201ENST00000527244 415 ntBASIC2.6□□□□□ -1.99
HOXC4P09017 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.6□□□□□ -1.99
HOXC4P09017 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
HOXC4P09017 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.6□□□□□ -1.99
HOXC4P09017 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.6□□□□□ -1.99
HOXC4P09017 AC012414.6-201ENST00000568241 401 ntBASIC2.6□□□□□ -1.99
HOXC4P09017 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.6□□□□□ -1.99
HOXC4P09017 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.6□□□□□ -1.99
HOXC4P09017 RSL24D1P11-201ENST00000591045 491 ntBASIC2.6□□□□□ -1.99
HOXC4P09017 AC023043.3-201ENST00000593113 385 ntBASIC2.6□□□□□ -1.99
HOXC4P09017 DUXAP4-201ENST00000603046 613 ntBASIC2.6□□□□□ -1.99
HOXC4P09017 DUXAP11-201ENST00000603858 526 ntBASIC2.6□□□□□ -1.99
HOXC4P09017 AC012443.1-201ENST00000605605 231 ntBASIC2.6□□□□□ -1.99
HOXC4P09017 AC091946.2-201ENST00000606105 291 ntBASIC2.6□□□□□ -1.99
HOXC4P09017 RN7SKP299-201ENST00000606679 301 ntBASIC2.6□□□□□ -1.99
HOXC4P09017 AC024560.3-201ENST00000608482 349 ntBASIC2.6□□□□□ -1.99
HOXC4P09017 AC245297.2-201ENST00000610119 565 ntBASIC2.6□□□□□ -1.99
HOXC4P09017 AL158063.1-201ENST00000615349 536 ntBASIC2.6□□□□□ -1.99
HOXC4P09017 AL138880.2-201ENST00000616214 239 ntBASIC2.6□□□□□ -1.99
HOXC4P09017 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
HOXC4P09017 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.6□□□□□ -1.99
HOXC4P09017 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.6□□□□□ -1.99
HOXC4P09017 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HOXC4P09017 AC011477.1-204ENST00000623416 1325 ntBASIC2.6□□□□□ -1.99
HOXC4P09017 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HOXC4P09017 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
HOXC4P09017 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HOXC4P09017 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.6□□□□□ -1.99
HOXC4P09017 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HOXC4P09017 RNU6-1155P-201ENST00000363554 107 ntBASIC2.59□□□□□ -1.99
HOXC4P09017 Y_RNA.194-201ENST00000363985 102 ntBASIC2.59□□□□□ -1.99
HOXC4P09017 RNU1-109P-201ENST00000383960 147 ntBASIC2.59□□□□□ -1.99
HOXC4P09017 RNU6-253P-201ENST00000384730 105 ntBASIC2.59□□□□□ -1.99
HOXC4P09017 AL139039.1-201ENST00000401900 692 ntBASIC2.59□□□□□ -1.99
HOXC4P09017 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
HOXC4P09017 MIR1284-201ENST00000408337 120 ntBASIC2.59□□□□□ -1.99
HOXC4P09017 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.59□□□□□ -1.99
HOXC4P09017 RPL7P30-201ENST00000420888 709 ntBASIC2.59□□□□□ -1.99
HOXC4P09017 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.59□□□□□ -1.99
HOXC4P09017 TMEM167AP1-201ENST00000423409 219 ntBASIC2.59□□□□□ -1.99
HOXC4P09017 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.59□□□□□ -1.99
HOXC4P09017 AL353706.1-201ENST00000436728 494 ntBASIC2.59□□□□□ -1.99
HOXC4P09017 AC011816.1-201ENST00000441346 546 ntBASIC2.59□□□□□ -1.99
HOXC4P09017 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.59□□□□□ -1.99
HOXC4P09017 ZNF114P1-201ENST00000453500 292 ntBASIC2.59□□□□□ -1.99
HOXC4P09017 RPL18AP17-201ENST00000455326 198 ntBASIC2.59□□□□□ -1.99
HOXC4P09017 AC104472.2-201ENST00000469035 601 ntBASIC2.59□□□□□ -1.99
HOXC4P09017 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
HOXC4P09017 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.59□□□□□ -1.99
HOXC4P09017 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.59□□□□□ -1.99
HOXC4P09017 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.59□□□□□ -1.99
HOXC4P09017 RPL23AP94-201ENST00000512518 302 ntBASIC2.59□□□□□ -1.99
HOXC4P09017 RNU6-678P-201ENST00000516832 109 ntBASIC2.59□□□□□ -1.99
HOXC4P09017 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.59□□□□□ -1.99
HOXC4P09017 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.59□□□□□ -1.99
HOXC4P09017 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.59□□□□□ -1.99
HOXC4P09017 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.59□□□□□ -1.99
HOXC4P09017 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.59□□□□□ -1.99
HOXC4P09017 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.59□□□□□ -1.99
HOXC4P09017 AC090502.2-201ENST00000549267 280 ntBASIC2.59□□□□□ -1.99
HOXC4P09017 AC024909.2-201ENST00000553035 286 ntBASIC2.59□□□□□ -1.99
HOXC4P09017 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms