Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC140113.4-201ENST00000622087 222 ntBASIC4.29□□□□□ -1.72
SHISA3A0PJX4 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHISA3A0PJX4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHISA3A0PJX4 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHISA3A0PJX4 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
SHISA3A0PJX4 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHISA3A0PJX4 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHISA3A0PJX4 Z95331.1-201ENST00000623075 23112 ntBASIC4.29□□□□□ -1.72
SHISA3A0PJX4 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.29□□□□□ -1.72
SHISA3A0PJX4 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SHISA3A0PJX4 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHISA3A0PJX4 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHISA3A0PJX4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHISA3A0PJX4 OR4G2P-202ENST00000641004 1759 ntBASIC4.28□□□□□ -1.72
SHISA3A0PJX4 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.28□□□□□ -1.72
SHISA3A0PJX4 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHISA3A0PJX4 RNU6-1093P-201ENST00000391194 107 ntBASIC4.28□□□□□ -1.72
SHISA3A0PJX4 U3.42-201ENST00000408746 214 ntBASIC4.28□□□□□ -1.72
SHISA3A0PJX4 SNORD56-201ENST00000413522 71 ntBASIC4.28□□□□□ -1.72
SHISA3A0PJX4 AC092423.1-201ENST00000430165 186 ntBASIC4.28□□□□□ -1.72
SHISA3A0PJX4 MYL8P-204ENST00000431574 518 ntBASIC4.28□□□□□ -1.72
SHISA3A0PJX4 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.28□□□□□ -1.72
SHISA3A0PJX4 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.28□□□□□ -1.72
SHISA3A0PJX4 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.28□□□□□ -1.72
SHISA3A0PJX4 RPS4XP1-201ENST00000482189 787 ntBASIC4.28□□□□□ -1.72
SHISA3A0PJX4 RPL30P10-201ENST00000488148 337 ntBASIC4.28□□□□□ -1.72
SHISA3A0PJX4 RPL21P13-201ENST00000488305 481 ntBASIC4.28□□□□□ -1.72
SHISA3A0PJX4 SCARNA15.2-201ENST00000516409 127 ntBASIC4.28□□□□□ -1.72
SHISA3A0PJX4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.28□□□□□ -1.72
SHISA3A0PJX4 RN7SL176P-201ENST00000580352 264 ntBASIC4.28□□□□□ -1.72
SHISA3A0PJX4 AC069307.1-201ENST00000602820 447 ntBASIC4.28□□□□□ -1.72
SHISA3A0PJX4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.28□□□□□ -1.72
SHISA3A0PJX4 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.28□□□□□ -1.72
SHISA3A0PJX4 MIR6886-201ENST00000619864 61 ntBASIC4.28□□□□□ -1.72
SHISA3A0PJX4 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.28□□□□□ -1.72
SHISA3A0PJX4 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.28□□□□□ -1.72
SHISA3A0PJX4 AC243829.7-201ENST00000633081 225 ntBASIC4.28□□□□□ -1.72
SHISA3A0PJX4 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.28□□□□□ -1.72
SHISA3A0PJX4 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.28□□□□□ -1.72
SHISA3A0PJX4 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.28□□□□□ -1.72
SHISA3A0PJX4 AC004925.1-201ENST00000624256 2706 ntBASIC4.28□□□□□ -1.72
SHISA3A0PJX4 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHISA3A0PJX4 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SHISA3A0PJX4 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.28□□□□□ -1.73
SHISA3A0PJX4 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SHISA3A0PJX4 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHISA3A0PJX4 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SHISA3A0PJX4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SHISA3A0PJX4 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHISA3A0PJX4 Y_RNA.26-201ENST00000362539 101 ntBASIC4.27□□□□□ -1.73
SHISA3A0PJX4 RNU1-76P-201ENST00000362903 159 ntBASIC4.27□□□□□ -1.73
SHISA3A0PJX4 RNU1-20P-201ENST00000363314 162 ntBASIC4.27□□□□□ -1.73
SHISA3A0PJX4 Y_RNA.471-201ENST00000384312 102 ntBASIC4.27□□□□□ -1.73
SHISA3A0PJX4 RN7SKP114-201ENST00000410327 279 ntBASIC4.27□□□□□ -1.73
SHISA3A0PJX4 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.27□□□□□ -1.73
SHISA3A0PJX4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.27□□□□□ -1.73
SHISA3A0PJX4 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.27□□□□□ -1.73
SHISA3A0PJX4 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.27□□□□□ -1.73
SHISA3A0PJX4 AC000111.2-201ENST00000448200 210 ntBASIC4.27□□□□□ -1.73
SHISA3A0PJX4 FABP5P15-201ENST00000453566 214 ntBASIC4.27□□□□□ -1.73
SHISA3A0PJX4 AC100832.1-201ENST00000471945 383 ntBASIC4.27□□□□□ -1.73
SHISA3A0PJX4 AC022795.1-201ENST00000473808 480 ntBASIC4.27□□□□□ -1.73
SHISA3A0PJX4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.27□□□□□ -1.73
SHISA3A0PJX4 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.27□□□□□ -1.73
SHISA3A0PJX4 MLLT10P2-201ENST00000506434 249 ntBASIC4.27□□□□□ -1.73
SHISA3A0PJX4 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
SHISA3A0PJX4 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.27□□□□□ -1.73
SHISA3A0PJX4 AC025465.3-201ENST00000510570 311 ntBASIC4.27□□□□□ -1.73
SHISA3A0PJX4 ATP5LP3-201ENST00000514223 304 ntBASIC4.27□□□□□ -1.73
SHISA3A0PJX4 RNA5SP362-201ENST00000516048 118 ntBASIC4.27□□□□□ -1.73
SHISA3A0PJX4 AC091144.1-201ENST00000519573 138 ntBASIC4.27□□□□□ -1.73
SHISA3A0PJX4 AP003733.2-201ENST00000529409 171 ntBASIC4.27□□□□□ -1.73
SHISA3A0PJX4 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SHISA3A0PJX4 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.27□□□□□ -1.73
SHISA3A0PJX4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.27□□□□□ -1.73
SHISA3A0PJX4 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.27□□□□□ -1.73
SHISA3A0PJX4 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.27□□□□□ -1.73
SHISA3A0PJX4 RPL21P7-201ENST00000557463 483 ntBASIC4.27□□□□□ -1.73
SHISA3A0PJX4 MIR3921-201ENST00000577308 85 ntBASIC4.27□□□□□ -1.73
SHISA3A0PJX4 AC105254.2-201ENST00000603636 436 ntBASIC4.27□□□□□ -1.73
SHISA3A0PJX4 AC098479.1-201ENST00000609225 154 ntBASIC4.27□□□□□ -1.73
SHISA3A0PJX4 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.27□□□□□ -1.73
SHISA3A0PJX4 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.27□□□□□ -1.73
SHISA3A0PJX4 AC074101.1-201ENST00000637861 241 ntBASIC4.27□□□□□ -1.73
SHISA3A0PJX4 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SHISA3A0PJX4 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
SHISA3A0PJX4 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHISA3A0PJX4 AC099654.2-201ENST00000433031 1980 ntBASIC4.27□□□□□ -1.73
SHISA3A0PJX4 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHISA3A0PJX4 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHISA3A0PJX4 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.27□□□□□ -1.73
SHISA3A0PJX4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.26□□□□□ -1.73
SHISA3A0PJX4 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHISA3A0PJX4 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHISA3A0PJX4 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHISA3A0PJX4 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.26□□□□□ -1.73
SHISA3A0PJX4 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SHISA3A0PJX4 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHISA3A0PJX4 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SHISA3A0PJX4 AC107068.1-201ENST00000563286 4218 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms