Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 RN7SKP57-201ENST00000517248 293 ntBASIC2.34□□□□□ -2.03
KCNIP1Q9NZI2 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.34□□□□□ -2.03
KCNIP1Q9NZI2 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.34□□□□□ -2.03
KCNIP1Q9NZI2 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.34□□□□□ -2.03
KCNIP1Q9NZI2 AC123904.3-201ENST00000547218 814 ntBASIC2.34□□□□□ -2.03
KCNIP1Q9NZI2 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.34□□□□□ -2.03
KCNIP1Q9NZI2 AC010546.1-201ENST00000569391 485 ntBASIC2.34□□□□□ -2.03
KCNIP1Q9NZI2 HMGN2P15-201ENST00000585707 270 ntBASIC2.34□□□□□ -2.03
KCNIP1Q9NZI2 AC002545.1-201ENST00000592511 181 ntBASIC2.34□□□□□ -2.03
KCNIP1Q9NZI2 AL161729.4-201ENST00000604650 476 ntBASIC2.34□□□□□ -2.03
KCNIP1Q9NZI2 AC018714.1-201ENST00000605028 208 ntBASIC2.34□□□□□ -2.03
KCNIP1Q9NZI2 AL136363.1-201ENST00000605349 337 ntBASIC2.34□□□□□ -2.03
KCNIP1Q9NZI2 YPEL5P2-201ENST00000605553 359 ntBASIC2.34□□□□□ -2.03
KCNIP1Q9NZI2 AC007038.2-201ENST00000608095 740 ntBASIC2.34□□□□□ -2.03
KCNIP1Q9NZI2 TUSC7.1-201ENST00000610969 165 ntBASIC2.34□□□□□ -2.03
KCNIP1Q9NZI2 AL162274.2-201ENST00000614406 332 ntBASIC2.34□□□□□ -2.03
KCNIP1Q9NZI2 AL355493.4-201ENST00000618530 292 ntBASIC2.34□□□□□ -2.03
KCNIP1Q9NZI2 AP002782.1-201ENST00000623107 614 ntBASIC2.34□□□□□ -2.03
KCNIP1Q9NZI2 AC068880.5-201ENST00000624331 290 ntBASIC2.34□□□□□ -2.03
KCNIP1Q9NZI2 AC097655.1-201ENST00000635075 318 ntBASIC2.34□□□□□ -2.03
KCNIP1Q9NZI2 OR8B1P-202ENST00000641132 1178 ntBASIC2.34□□□□□ -2.03
KCNIP1Q9NZI2 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.04
KCNIP1Q9NZI2 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.04
KCNIP1Q9NZI2 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 AC006378.2-201ENST00000623178 2476 ntBASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 RNA5SP374-201ENST00000362939 125 ntBASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 SNORA72.3-201ENST00000365074 132 ntBASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 AC078974.1-201ENST00000411597 223 ntBASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 RPS3AP25-201ENST00000411660 793 ntBASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 GTF2IP20-201ENST00000431663 360 ntBASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 UBE2FP3-201ENST00000436366 524 ntBASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 Z80107.1-201ENST00000436830 412 ntBASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 AC005094.1-201ENST00000440420 368 ntBASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 RPL7P36-201ENST00000444633 681 ntBASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 UBBP3-201ENST00000445497 241 ntBASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 Z96811.1-201ENST00000445880 108 ntBASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 RPS29P20-201ENST00000489592 171 ntBASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 SUMO2P6-201ENST00000505273 288 ntBASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 AC068587.4-201ENST00000533893 186 ntBASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 AC007115.1-201ENST00000546853 234 ntBASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 MIR4293-201ENST00000584305 78 ntBASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 AC010620.2-201ENST00000600135 313 ntBASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 DPPA3P3-201ENST00000603842 430 ntBASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 AC025588.2-201ENST00000604851 466 ntBASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 AC091965.4-201ENST00000607691 587 ntBASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 FTX_3.1-201ENST00000610451 147 ntBASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 AL136313.1-201ENST00000624804 202 ntBASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 AC022336.2-201ENST00000568966 2538 ntBASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 AC008669.1-201ENST00000565823 2178 ntBASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
KCNIP1Q9NZI2 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.32□□□□□ -2.04
KCNIP1Q9NZI2 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
KCNIP1Q9NZI2 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KCNIP1Q9NZI2 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
KCNIP1Q9NZI2 RNU6-660P-201ENST00000364566 109 ntBASIC2.32□□□□□ -2.04
KCNIP1Q9NZI2 MIR592-201ENST00000384959 97 ntBASIC2.32□□□□□ -2.04
KCNIP1Q9NZI2 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
KCNIP1Q9NZI2 RN7SKP27-201ENST00000410684 333 ntBASIC2.32□□□□□ -2.04
KCNIP1Q9NZI2 VPS26BP1-201ENST00000417155 755 ntBASIC2.32□□□□□ -2.04
KCNIP1Q9NZI2 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.32□□□□□ -2.04
KCNIP1Q9NZI2 ZNF863P-201ENST00000426746 417 ntBASIC2.32□□□□□ -2.04
KCNIP1Q9NZI2 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.32□□□□□ -2.04
KCNIP1Q9NZI2 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.32□□□□□ -2.04
KCNIP1Q9NZI2 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.32□□□□□ -2.04
KCNIP1Q9NZI2 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.32□□□□□ -2.04
KCNIP1Q9NZI2 ELOCP30-201ENST00000447108 299 ntBASIC2.32□□□□□ -2.04
KCNIP1Q9NZI2 AC003982.1-202ENST00000469928 248 ntBASIC2.32□□□□□ -2.04
KCNIP1Q9NZI2 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.32□□□□□ -2.04
KCNIP1Q9NZI2 RN7SL297P-201ENST00000483161 293 ntBASIC2.32□□□□□ -2.04
KCNIP1Q9NZI2 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.32□□□□□ -2.04
KCNIP1Q9NZI2 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.32□□□□□ -2.04
KCNIP1Q9NZI2 RNU6-390P-201ENST00000516259 103 ntBASIC2.32□□□□□ -2.04
KCNIP1Q9NZI2 RNU6-64P-201ENST00000517119 105 ntBASIC2.32□□□□□ -2.04
KCNIP1Q9NZI2 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.32□□□□□ -2.04
KCNIP1Q9NZI2 MTCO1P47-201ENST00000523889 1271 ntBASIC2.32□□□□□ -2.04
KCNIP1Q9NZI2 AC087373.1-201ENST00000524920 491 ntBASIC2.32□□□□□ -2.04
KCNIP1Q9NZI2 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
KCNIP1Q9NZI2 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.32□□□□□ -2.04
KCNIP1Q9NZI2 AC009097.3-201ENST00000563557 1018 ntBASIC2.32□□□□□ -2.04
KCNIP1Q9NZI2 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.32□□□□□ -2.04
KCNIP1Q9NZI2 MIR1254-2-201ENST00000579553 63 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms