Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.36□□□□□ -1.71
SPTLC3Q9NUV7 HMGB3P8-201ENST00000449709 577 ntBASIC4.36□□□□□ -1.71
SPTLC3Q9NUV7 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.36□□□□□ -1.71
SPTLC3Q9NUV7 AC007547.1-201ENST00000462177 490 ntBASIC4.36□□□□□ -1.71
SPTLC3Q9NUV7 TRBV1-201ENST00000476502 284 ntBASIC4.36□□□□□ -1.71
SPTLC3Q9NUV7 AC108860.1-201ENST00000484521 383 ntBASIC4.36□□□□□ -1.71
SPTLC3Q9NUV7 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.36□□□□□ -1.71
SPTLC3Q9NUV7 AC078817.1-201ENST00000492623 435 ntBASIC4.36□□□□□ -1.71
SPTLC3Q9NUV7 AC026784.1-201ENST00000507986 352 ntBASIC4.36□□□□□ -1.71
SPTLC3Q9NUV7 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.36□□□□□ -1.71
SPTLC3Q9NUV7 RN7SKP83-201ENST00000516512 178 ntBASIC4.36□□□□□ -1.71
SPTLC3Q9NUV7 RNU6-677P-201ENST00000516914 101 ntBASIC4.36□□□□□ -1.71
SPTLC3Q9NUV7 AC243972.3-201ENST00000539655 198 ntBASIC4.36□□□□□ -1.71
SPTLC3Q9NUV7 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.36□□□□□ -1.71
SPTLC3Q9NUV7 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.36□□□□□ -1.71
SPTLC3Q9NUV7 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
SPTLC3Q9NUV7 MIR4715-201ENST00000584117 79 ntBASIC4.36□□□□□ -1.71
SPTLC3Q9NUV7 MIR4719-201ENST00000585233 84 ntBASIC4.36□□□□□ -1.71
SPTLC3Q9NUV7 AC012409.4-201ENST00000612923 249 ntBASIC4.36□□□□□ -1.71
SPTLC3Q9NUV7 AC093913.1-201ENST00000614178 329 ntBASIC4.36□□□□□ -1.71
SPTLC3Q9NUV7 AL359547.2-201ENST00000615810 418 ntBASIC4.36□□□□□ -1.71
SPTLC3Q9NUV7 MIR7641-1-201ENST00000627518 61 ntBASIC4.36□□□□□ -1.71
SPTLC3Q9NUV7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SPTLC3Q9NUV7 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SPTLC3Q9NUV7 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SPTLC3Q9NUV7 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SPTLC3Q9NUV7 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 RNU6-398P-201ENST00000384143 109 ntBASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 MIR184-201ENST00000384962 84 ntBASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 AL590704.1-201ENST00000402856 794 ntBASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 RN7SKP32-201ENST00000410167 303 ntBASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 TOMM22P1-201ENST00000418578 312 ntBASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 AL159169.1-201ENST00000421119 127 ntBASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 RPS6P12-201ENST00000432491 726 ntBASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 RPL21P112-201ENST00000434403 463 ntBASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 FABP5P13-201ENST00000452144 328 ntBASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 RPL29P14-201ENST00000495837 428 ntBASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 SNORA31.3-201ENST00000516029 96 ntBASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 RN7SKP60-201ENST00000516985 239 ntBASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 AC022690.1-201ENST00000526681 550 ntBASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 SNRPGP16-201ENST00000533275 226 ntBASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 PSMA3P-201ENST00000555485 635 ntBASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 AC090877.1-201ENST00000561418 344 ntBASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 MIR4738-201ENST00000579134 87 ntBASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 AL390240.1-201ENST00000612950 384 ntBASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 AL731566.2-201ENST00000618971 317 ntBASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 AL136221.1-201ENST00000621449 509 ntBASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 AL357559.1-201ENST00000622228 274 ntBASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 AC090617.10-201ENST00000624308 134 ntBASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
SPTLC3Q9NUV7 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 RNA5SP447-201ENST00000363749 119 ntBASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 RNU6-190P-201ENST00000384154 102 ntBASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 RNU6-550P-201ENST00000391057 101 ntBASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 AL592114.1-201ENST00000403842 483 ntBASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 COX6B1P7-201ENST00000430845 235 ntBASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 HMGB1P27-201ENST00000431429 603 ntBASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 TPT1P12-201ENST00000448968 492 ntBASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 RPL23AP31-201ENST00000456160 467 ntBASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 RPS29P33-201ENST00000456717 146 ntBASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 RNA5SP246-201ENST00000458909 119 ntBASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 snoU13.4-201ENST00000458916 104 ntBASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 AC092451.1-201ENST00000480211 153 ntBASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 AC078918.1-201ENST00000498515 228 ntBASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 RNU6-1314P-201ENST00000517139 104 ntBASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 AC087241.2-201ENST00000535801 324 ntBASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 AC135001.1-201ENST00000544546 283 ntBASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 MIR3921-201ENST00000577308 85 ntBASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 MIR4697-201ENST00000582977 78 ntBASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 MIR5684-201ENST00000585074 65 ntBASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 VN1R80P-201ENST00000597126 338 ntBASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 AL138889.2-201ENST00000603883 242 ntBASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 AC007619.2-201ENST00000605743 379 ntBASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 AL355810.1-201ENST00000614629 552 ntBASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 uc_338.32-201ENST00000615087 172 ntBASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 MTND4P29-201ENST00000503122 1372 ntBASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 AC139713.2-214ENST00000642059 1811 ntBASIC4.34□□□□□ -1.71
SPTLC3Q9NUV7 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SPTLC3Q9NUV7 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.34□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms