Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.26□□□□□ -1.89
HINT3Q9NQE9 CEACAMP4-201ENST00000457676 421 ntBASIC3.26□□□□□ -1.89
HINT3Q9NQE9 AC126389.1-201ENST00000477436 290 ntBASIC3.26□□□□□ -1.89
HINT3Q9NQE9 AC126182.1-201ENST00000478134 357 ntBASIC3.26□□□□□ -1.89
HINT3Q9NQE9 AC019235.1-201ENST00000503847 207 ntBASIC3.26□□□□□ -1.89
HINT3Q9NQE9 AC117522.1-201ENST00000509821 380 ntBASIC3.26□□□□□ -1.89
HINT3Q9NQE9 AC009646.1-201ENST00000510455 318 ntBASIC3.26□□□□□ -1.89
HINT3Q9NQE9 RNU6-1256P-201ENST00000516539 103 ntBASIC3.26□□□□□ -1.89
HINT3Q9NQE9 RN7SKP60-201ENST00000516985 239 ntBASIC3.26□□□□□ -1.89
HINT3Q9NQE9 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.26□□□□□ -1.89
HINT3Q9NQE9 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.26□□□□□ -1.89
HINT3Q9NQE9 NDUFB9P3-201ENST00000521269 501 ntBASIC3.26□□□□□ -1.89
HINT3Q9NQE9 OR5G4P-201ENST00000525251 760 ntBASIC3.26□□□□□ -1.89
HINT3Q9NQE9 AP001646.1-201ENST00000527936 915 ntBASIC3.26□□□□□ -1.89
HINT3Q9NQE9 OR4R1P-201ENST00000529879 463 ntBASIC3.26□□□□□ -1.89
HINT3Q9NQE9 AP003034.1-201ENST00000534621 422 ntBASIC3.26□□□□□ -1.89
HINT3Q9NQE9 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.26□□□□□ -1.89
HINT3Q9NQE9 SYF2P1-201ENST00000550658 413 ntBASIC3.26□□□□□ -1.89
HINT3Q9NQE9 AL359212.1-201ENST00000556608 614 ntBASIC3.26□□□□□ -1.89
HINT3Q9NQE9 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.26□□□□□ -1.89
HINT3Q9NQE9 AC034105.4-201ENST00000568304 277 ntBASIC3.26□□□□□ -1.89
HINT3Q9NQE9 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.26□□□□□ -1.89
HINT3Q9NQE9 AC025165.5-201ENST00000602802 578 ntBASIC3.26□□□□□ -1.89
HINT3Q9NQE9 AC012507.3-201ENST00000603556 477 ntBASIC3.26□□□□□ -1.89
HINT3Q9NQE9 AC092794.1-201ENST00000612734 582 ntBASIC3.26□□□□□ -1.89
HINT3Q9NQE9 AL110115.1-201ENST00000614396 364 ntBASIC3.26□□□□□ -1.89
HINT3Q9NQE9 AC139792.3-201ENST00000623525 224 ntBASIC3.26□□□□□ -1.89
HINT3Q9NQE9 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.26□□□□□ -1.89
HINT3Q9NQE9 AC008568.2-201ENST00000623862 2313 ntBASIC3.26□□□□□ -1.89
HINT3Q9NQE9 AL137003.2-201ENST00000606924 2538 ntBASIC3.26□□□□□ -1.89
HINT3Q9NQE9 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HINT3Q9NQE9 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HINT3Q9NQE9 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HINT3Q9NQE9 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HINT3Q9NQE9 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HINT3Q9NQE9 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HINT3Q9NQE9 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HINT3Q9NQE9 AC068647.1-201ENST00000489539 2265 ntBASIC3.25□□□□□ -1.89
HINT3Q9NQE9 OR4G2P-201ENST00000328113 903 ntBASIC3.25□□□□□ -1.89
HINT3Q9NQE9 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HINT3Q9NQE9 SNORA62.3-201ENST00000365110 153 ntBASIC3.25□□□□□ -1.89
HINT3Q9NQE9 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HINT3Q9NQE9 Y_RNA.554-201ENST00000384672 102 ntBASIC3.25□□□□□ -1.89
HINT3Q9NQE9 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
HINT3Q9NQE9 RPS4XP8-201ENST00000402039 771 ntBASIC3.25□□□□□ -1.89
HINT3Q9NQE9 MIR548F1-201ENST00000408667 84 ntBASIC3.25□□□□□ -1.89
HINT3Q9NQE9 RNU2-9P-201ENST00000410194 145 ntBASIC3.25□□□□□ -1.89
HINT3Q9NQE9 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.25□□□□□ -1.89
HINT3Q9NQE9 UBE2D3P2-201ENST00000424409 445 ntBASIC3.25□□□□□ -1.89
HINT3Q9NQE9 AC091390.3-201ENST00000426478 338 ntBASIC3.25□□□□□ -1.89
HINT3Q9NQE9 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.25□□□□□ -1.89
HINT3Q9NQE9 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.25□□□□□ -1.89
HINT3Q9NQE9 RPL36AP6-201ENST00000435770 321 ntBASIC3.25□□□□□ -1.89
HINT3Q9NQE9 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.25□□□□□ -1.89
HINT3Q9NQE9 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
HINT3Q9NQE9 RPL23AP20-201ENST00000447965 421 ntBASIC3.25□□□□□ -1.89
HINT3Q9NQE9 AC013267.1-201ENST00000458227 267 ntBASIC3.25□□□□□ -1.89
HINT3Q9NQE9 RN7SL542P-201ENST00000467147 294 ntBASIC3.25□□□□□ -1.89
HINT3Q9NQE9 AC116562.3-201ENST00000506136 177 ntBASIC3.25□□□□□ -1.89
HINT3Q9NQE9 ARL4AP2-201ENST00000507378 601 ntBASIC3.25□□□□□ -1.89
HINT3Q9NQE9 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.25□□□□□ -1.89
HINT3Q9NQE9 SNORD27.1-201ENST00000516319 72 ntBASIC3.25□□□□□ -1.89
HINT3Q9NQE9 RNU6-1231P-201ENST00000517185 103 ntBASIC3.25□□□□□ -1.89
HINT3Q9NQE9 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.25□□□□□ -1.89
HINT3Q9NQE9 AC068587.5-201ENST00000528506 175 ntBASIC3.25□□□□□ -1.89
HINT3Q9NQE9 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
HINT3Q9NQE9 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.25□□□□□ -1.89
HINT3Q9NQE9 AC004024.1-201ENST00000549244 247 ntBASIC3.25□□□□□ -1.89
HINT3Q9NQE9 NCAPGP2-201ENST00000557911 754 ntBASIC3.25□□□□□ -1.89
HINT3Q9NQE9 TGIF1P1-201ENST00000558095 802 ntBASIC3.25□□□□□ -1.89
HINT3Q9NQE9 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.25□□□□□ -1.89
HINT3Q9NQE9 AC087499.8-201ENST00000578406 226 ntBASIC3.25□□□□□ -1.89
HINT3Q9NQE9 AC067852.3-201ENST00000589177 561 ntBASIC3.25□□□□□ -1.89
HINT3Q9NQE9 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.25□□□□□ -1.89
HINT3Q9NQE9 AC007363.1-201ENST00000604736 620 ntBASIC3.25□□□□□ -1.89
HINT3Q9NQE9 AC007619.2-201ENST00000605743 379 ntBASIC3.25□□□□□ -1.89
HINT3Q9NQE9 AC022149.2-201ENST00000621061 203 ntBASIC3.25□□□□□ -1.89
HINT3Q9NQE9 AC007998.5-201ENST00000622938 237 ntBASIC3.25□□□□□ -1.89
HINT3Q9NQE9 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.25□□□□□ -1.89
HINT3Q9NQE9 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HINT3Q9NQE9 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.25□□□□□ -1.89
HINT3Q9NQE9 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.25□□□□□ -1.89
HINT3Q9NQE9 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HINT3Q9NQE9 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
HINT3Q9NQE9 Y_RNA.372-201ENST00000365599 102 ntBASIC3.24□□□□□ -1.89
HINT3Q9NQE9 RNU6-946P-201ENST00000383878 107 ntBASIC3.24□□□□□ -1.89
HINT3Q9NQE9 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
HINT3Q9NQE9 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.24□□□□□ -1.89
HINT3Q9NQE9 AC114491.1-201ENST00000416095 246 ntBASIC3.24□□□□□ -1.89
HINT3Q9NQE9 AL445584.1-201ENST00000431451 330 ntBASIC3.24□□□□□ -1.89
HINT3Q9NQE9 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.24□□□□□ -1.89
HINT3Q9NQE9 USP9YP28-201ENST00000435142 589 ntBASIC3.24□□□□□ -1.89
HINT3Q9NQE9 NEFMP1-201ENST00000443423 1006 ntBASIC3.24□□□□□ -1.89
HINT3Q9NQE9 NOTCH2P1-201ENST00000443481 624 ntBASIC3.24□□□□□ -1.89
HINT3Q9NQE9 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.24□□□□□ -1.89
HINT3Q9NQE9 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HINT3Q9NQE9 Z99127.3-201ENST00000448158 395 ntBASIC3.24□□□□□ -1.89
HINT3Q9NQE9 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HINT3Q9NQE9 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.24□□□□□ -1.89
HINT3Q9NQE9 HMGN1P11-201ENST00000508668 303 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 156.5 ms