Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 CAST-202ENST00000325674 3356 ntTSL 5 BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 AC114324.1-201ENST00000504077 3152 ntBASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 SNORA25.5-201ENST00000363782 126 ntBASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 Y_RNA.370-201ENST00000365589 108 ntBASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 FHL1-203ENST00000370676 833 ntTSL 5 BASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 RNA5SP323-201ENST00000391094 133 ntBASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 RNU2-63P-201ENST00000410792 194 ntBASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 AC134879.1-201ENST00000426062 394 ntBASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 AL807761.3-201ENST00000427833 329 ntTSL 3 BASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 LINC01015-204ENST00000445296 399 ntTSL 3 BASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 UBE2R2-AS1-201ENST00000454429 647 ntTSL 5 BASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 RN7SL554P-201ENST00000468197 292 ntBASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 AP002884.2-201ENST00000471647 395 ntBASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 SNORA31.1-201ENST00000515993 133 ntBASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 SNORA31.5-201ENST00000516190 133 ntBASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 RNU7-28P-201ENST00000516759 62 ntBASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 CCAR2-208ENST00000521301 337 ntTSL 3 BASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 RN7SL138P-201ENST00000577405 287 ntBASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 MIR3972-201ENST00000582732 87 ntBASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 RPIAP1-201ENST00000587900 742 ntBASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 AL356458.1-201ENST00000604764 465 ntBASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 CD28-201ENST00000324106 4812 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 GLI1-201ENST00000228682 3613 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
KRTAP3-3Q9BYR6 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 AC005618.1-201ENST00000606901 3148 ntBASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 SMG1P1-202ENST00000309865 4223 ntBASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 RNA5SP479-201ENST00000364858 117 ntBASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 RNU1-8P-201ENST00000384328 165 ntBASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 SNORD90-201ENST00000391145 111 ntBASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 AL645927.1-201ENST00000396783 406 ntBASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 AL683807.1-201ENST00000427886 445 ntTSL 2 BASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 FTLP19-201ENST00000433300 394 ntBASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 AC015922.2-201ENST00000435593 184 ntBASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 snoU13.17-201ENST00000458802 104 ntBASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 RN7SL870P-201ENST00000460111 296 ntBASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 RN7SL449P-201ENST00000464937 286 ntBASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 RN7SL146P-201ENST00000472338 297 ntBASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 PDPN-205ENST00000487038 607 ntTSL 2 BASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 AC018868.1-201ENST00000491307 315 ntBASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 AC106774.1-201ENST00000515105 321 ntBASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 RNU6-75P-201ENST00000515944 104 ntBASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 MT1L-202ENST00000566367 78 ntBASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 TBC1D29-204ENST00000584297 602 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 AP002505.1-201ENST00000592655 228 ntTSL 5 BASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 OR5AH1P-201ENST00000595968 283 ntBASIC3.92□□□□□ -1.78
KRTAP3-3Q9BYR6 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms