Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ATG4DQ86TL0 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
ATG4DQ86TL0 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ATG4DQ86TL0 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.44□□□□□ -1.7
ATG4DQ86TL0 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.43□□□□□ -1.7
ATG4DQ86TL0 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 SNORD50.2-201ENST00000365465 70 ntBASIC4.43□□□□□ -1.7
ATG4DQ86TL0 RNU6-804P-201ENST00000384286 107 ntBASIC4.43□□□□□ -1.7
ATG4DQ86TL0 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 U3.29-201ENST00000391296 212 ntBASIC4.43□□□□□ -1.7
ATG4DQ86TL0 RNU6-325P-201ENST00000411132 105 ntBASIC4.43□□□□□ -1.7
ATG4DQ86TL0 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 AC007098.1-201ENST00000420122 367 ntBASIC4.43□□□□□ -1.7
ATG4DQ86TL0 EIF4HP2-201ENST00000424380 563 ntBASIC4.43□□□□□ -1.7
ATG4DQ86TL0 CKS1BP6-201ENST00000424932 240 ntBASIC4.43□□□□□ -1.7
ATG4DQ86TL0 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 AL445305.1-201ENST00000432577 575 ntBASIC4.43□□□□□ -1.7
ATG4DQ86TL0 AL049745.1-201ENST00000433953 286 ntBASIC4.43□□□□□ -1.7
ATG4DQ86TL0 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 AC091021.1-201ENST00000468051 388 ntBASIC4.43□□□□□ -1.7
ATG4DQ86TL0 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 AC087190.1-201ENST00000484462 480 ntBASIC4.43□□□□□ -1.7
ATG4DQ86TL0 AC107032.1-201ENST00000485945 480 ntBASIC4.43□□□□□ -1.7
ATG4DQ86TL0 VN1R105P-201ENST00000486595 910 ntBASIC4.43□□□□□ -1.7
ATG4DQ86TL0 AC010469.2-201ENST00000496412 480 ntBASIC4.43□□□□□ -1.7
ATG4DQ86TL0 AC140172.1-201ENST00000502928 141 ntBASIC4.43□□□□□ -1.7
ATG4DQ86TL0 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 OR51K1P-201ENST00000510214 950 ntBASIC4.43□□□□□ -1.7
ATG4DQ86TL0 AC113155.1-201ENST00000511141 769 ntBASIC4.43□□□□□ -1.7
ATG4DQ86TL0 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 RNU6-513P-201ENST00000516104 104 ntBASIC4.43□□□□□ -1.7
ATG4DQ86TL0 RNU6-27P-201ENST00000516146 107 ntBASIC4.43□□□□□ -1.7
ATG4DQ86TL0 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 AL358913.1-201ENST00000554342 121 ntBASIC4.43□□□□□ -1.7
ATG4DQ86TL0 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 RPL21P7-201ENST00000557463 483 ntBASIC4.43□□□□□ -1.7
ATG4DQ86TL0 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 RN7SL435P-201ENST00000584418 282 ntBASIC4.43□□□□□ -1.7
ATG4DQ86TL0 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.43□□□□□ -1.7
ATG4DQ86TL0 AL022401.1-201ENST00000619498 108 ntBASIC4.43□□□□□ -1.7
ATG4DQ86TL0 AC091905.4-201ENST00000623432 202 ntBASIC4.43□□□□□ -1.7
ATG4DQ86TL0 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
ATG4DQ86TL0 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
ATG4DQ86TL0 DHX9P1-201ENST00000436565 3076 ntBASIC4.42□□□□□ -1.7
ATG4DQ86TL0 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.42□□□□□ -1.7
ATG4DQ86TL0 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ATG4DQ86TL0 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.42□□□□□ -1.7
ATG4DQ86TL0 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
ATG4DQ86TL0 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
ATG4DQ86TL0 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ATG4DQ86TL0 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
ATG4DQ86TL0 U3.35-201ENST00000408405 208 ntBASIC4.42□□□□□ -1.7
ATG4DQ86TL0 AL160275.3-201ENST00000423876 471 ntBASIC4.42□□□□□ -1.7
ATG4DQ86TL0 AL159987.2-201ENST00000432754 307 ntBASIC4.42□□□□□ -1.7
ATG4DQ86TL0 AC093414.1-201ENST00000434712 514 ntBASIC4.42□□□□□ -1.7
ATG4DQ86TL0 AL772161.1-201ENST00000439130 476 ntBASIC4.42□□□□□ -1.7
ATG4DQ86TL0 SDAD1P2-201ENST00000441308 2028 ntBASIC4.42□□□□□ -1.7
ATG4DQ86TL0 RNU6-1218P-201ENST00000458990 108 ntBASIC4.42□□□□□ -1.7
ATG4DQ86TL0 AC020890.1-201ENST00000491837 504 ntBASIC4.42□□□□□ -1.7
ATG4DQ86TL0 RPS23P5-201ENST00000495419 428 ntBASIC4.42□□□□□ -1.7
ATG4DQ86TL0 RN7SL558P-201ENST00000497468 299 ntBASIC4.42□□□□□ -1.7
ATG4DQ86TL0 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.42□□□□□ -1.7
ATG4DQ86TL0 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.42□□□□□ -1.7
ATG4DQ86TL0 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.42□□□□□ -1.7
ATG4DQ86TL0 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.42□□□□□ -1.7
ATG4DQ86TL0 MRPS36P4-201ENST00000534436 298 ntBASIC4.42□□□□□ -1.7
ATG4DQ86TL0 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.42□□□□□ -1.7
ATG4DQ86TL0 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.42□□□□□ -1.7
ATG4DQ86TL0 SNORA74C-1-201ENST00000580726 201 ntBASIC4.42□□□□□ -1.7
ATG4DQ86TL0 OR1M4P-201ENST00000589199 287 ntBASIC4.42□□□□□ -1.7
ATG4DQ86TL0 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.42□□□□□ -1.7
ATG4DQ86TL0 AC068790.4-201ENST00000602474 263 ntBASIC4.42□□□□□ -1.7
ATG4DQ86TL0 AC007566.2-201ENST00000603642 413 ntBASIC4.42□□□□□ -1.7
ATG4DQ86TL0 AC104465.1-201ENST00000611365 139 ntBASIC4.42□□□□□ -1.7
ATG4DQ86TL0 TUG1_2.1-201ENST00000614234 87 ntBASIC4.42□□□□□ -1.7
ATG4DQ86TL0 AL596275.2-204ENST00000641628 552 ntBASIC4.42□□□□□ -1.7
ATG4DQ86TL0 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms