Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 AC113403.1-201ENST00000604910 193 ntBASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 DLEU2_5.1-201ENST00000615567 84 ntBASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 MIR8062-201ENST00000621515 85 ntBASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 MPP6-209ENST00000625307 126 ntTSL 5 BASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 MIR6715B-201ENST00000637172 77 ntBASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CSB-PGBD3P0DP91 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CSB-PGBD3P0DP91 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
CSB-PGBD3P0DP91 MIR331-201ENST00000362302 94 ntBASIC5.99□□□□□ -1.45
CSB-PGBD3P0DP91 SNORA23-201ENST00000365128 182 ntBASIC5.99□□□□□ -1.45
CSB-PGBD3P0DP91 RPL7P46-201ENST00000425129 740 ntBASIC5.99□□□□□ -1.45
CSB-PGBD3P0DP91 RPL21P2-201ENST00000440049 481 ntBASIC5.99□□□□□ -1.45
CSB-PGBD3P0DP91 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.99□□□□□ -1.45
CSB-PGBD3P0DP91 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.99□□□□□ -1.45
CSB-PGBD3P0DP91 AC008571.1-201ENST00000467232 300 ntBASIC5.99□□□□□ -1.45
CSB-PGBD3P0DP91 RNU6-390P-201ENST00000516259 103 ntBASIC5.99□□□□□ -1.45
CSB-PGBD3P0DP91 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC5.99□□□□□ -1.45
CSB-PGBD3P0DP91 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.99□□□□□ -1.45
CSB-PGBD3P0DP91 GNAI2P1-201ENST00000541815 315 ntBASIC5.99□□□□□ -1.45
CSB-PGBD3P0DP91 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.99□□□□□ -1.45
CSB-PGBD3P0DP91 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.99□□□□□ -1.45
CSB-PGBD3P0DP91 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.99□□□□□ -1.45
CSB-PGBD3P0DP91 PISRT1.1-201ENST00000616930 107 ntBASIC5.99□□□□□ -1.45
CSB-PGBD3P0DP91 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CSB-PGBD3P0DP91 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CSB-PGBD3P0DP91 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CSB-PGBD3P0DP91 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.99□□□□□ -1.45
CSB-PGBD3P0DP91 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
CSB-PGBD3P0DP91 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.98□□□□□ -1.45
CSB-PGBD3P0DP91 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.98□□□□□ -1.45
CSB-PGBD3P0DP91 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.98□□□□□ -1.45
CSB-PGBD3P0DP91 AC107068.1-201ENST00000563286 4218 ntBASIC5.98□□□□□ -1.45
CSB-PGBD3P0DP91 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CSB-PGBD3P0DP91 MIR372-201ENST00000362225 67 ntBASIC5.98□□□□□ -1.45
CSB-PGBD3P0DP91 SMIM11P1-201ENST00000369586 178 ntBASIC5.98□□□□□ -1.45
CSB-PGBD3P0DP91 RNU6-946P-201ENST00000383878 107 ntBASIC5.98□□□□□ -1.45
CSB-PGBD3P0DP91 AL583834.1-201ENST00000406943 343 ntBASIC5.98□□□□□ -1.45
CSB-PGBD3P0DP91 RNU4-46P-201ENST00000410818 138 ntBASIC5.98□□□□□ -1.45
CSB-PGBD3P0DP91 AC090774.1-201ENST00000435925 246 ntBASIC5.98□□□□□ -1.45
CSB-PGBD3P0DP91 CYCSP43-201ENST00000438233 310 ntBASIC5.98□□□□□ -1.45
CSB-PGBD3P0DP91 DYNLT3P2-201ENST00000442517 295 ntBASIC5.98□□□□□ -1.45
CSB-PGBD3P0DP91 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC5.98□□□□□ -1.45
CSB-PGBD3P0DP91 AC108145.1-201ENST00000503770 153 ntBASIC5.98□□□□□ -1.45
CSB-PGBD3P0DP91 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC5.98□□□□□ -1.45
CSB-PGBD3P0DP91 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.98□□□□□ -1.45
CSB-PGBD3P0DP91 TRAV8-5-201ENST00000537369 341 ntBASIC5.98□□□□□ -1.45
CSB-PGBD3P0DP91 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.98□□□□□ -1.45
CSB-PGBD3P0DP91 AC006130.2-201ENST00000586202 326 ntBASIC5.98□□□□□ -1.45
CSB-PGBD3P0DP91 AC092447.9-201ENST00000603395 144 ntBASIC5.98□□□□□ -1.45
CSB-PGBD3P0DP91 AC004805.2-201ENST00000605382 482 ntBASIC5.98□□□□□ -1.45
CSB-PGBD3P0DP91 AC141273.2-201ENST00000618989 130 ntBASIC5.98□□□□□ -1.45
CSB-PGBD3P0DP91 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
CSB-PGBD3P0DP91 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CSB-PGBD3P0DP91 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.98□□□□□ -1.45
CSB-PGBD3P0DP91 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 RNU6-490P-201ENST00000362985 107 ntBASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 Y_RNA.117-201ENST00000363294 101 ntBASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 Y_RNA.288-201ENST00000364854 92 ntBASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 RNU1-115P-201ENST00000365329 160 ntBASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 RNU6-701P-201ENST00000384059 107 ntBASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 AC110754.1-201ENST00000399740 601 ntBASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 RNU6-101P-201ENST00000410323 104 ntBASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 Y_RNA.594-201ENST00000410373 140 ntBASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 RNU6-1050P-201ENST00000410388 107 ntBASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 OR2AH1P-201ENST00000425717 928 ntBASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 TDGF1P1-201ENST00000445734 527 ntBASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 AC116337.1-201ENST00000509680 687 ntBASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 MTND1P19-201ENST00000511780 315 ntBASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 Y_RNA.708-201ENST00000516950 96 ntBASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 CYCSP40-201ENST00000575927 294 ntBASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 uc_338.13-201ENST00000618243 179 ntBASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 AC103705.1-201ENST00000619013 241 ntBASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 AL357559.1-201ENST00000622228 274 ntBASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 AC006065.5-201ENST00000623427 349 ntBASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms