Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 RPP40P2-201ENST00000603596 712 ntBASIC2.37□□□□□ -2.03
CDX2Q99626 AC069304.2-201ENST00000605154 435 ntBASIC2.37□□□□□ -2.03
CDX2Q99626 CRYM-AS1-204ENST00000637983 556 ntBASIC2.37□□□□□ -2.03
CDX2Q99626 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CDX2Q99626 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.37□□□□□ -2.03
CDX2Q99626 AC138915.1-201ENST00000565427 1685 ntBASIC2.37□□□□□ -2.03
CDX2Q99626 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CDX2Q99626 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
CDX2Q99626 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
CDX2Q99626 RNU6-457P-201ENST00000363999 107 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 Y_RNA.408-201ENST00000383987 102 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 RNU6-878P-201ENST00000384578 110 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 SNORA41-201ENST00000384675 132 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 SNORA40.2-201ENST00000390847 128 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 RNU2-15P-201ENST00000410692 191 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 RNA5SP270-201ENST00000411361 118 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 MTND4P3-201ENST00000417829 541 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 AC007435.1-201ENST00000421086 415 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 HMGN2P30-201ENST00000423237 256 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 AC007742.1-201ENST00000425789 329 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.36□□□□□ -2.03
CDX2Q99626 RPS15AP28-201ENST00000435088 386 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 ELOCP26-201ENST00000436067 329 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 MTND2P20-201ENST00000440805 661 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.36□□□□□ -2.03
CDX2Q99626 RPL39P6-201ENST00000448289 150 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.36□□□□□ -2.03
CDX2Q99626 PNPLA4P1-201ENST00000458328 305 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 AC026410.2-201ENST00000460281 156 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 AC092757.1-201ENST00000467293 467 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 AIG1P1-201ENST00000503376 148 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.36□□□□□ -2.03
CDX2Q99626 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.36□□□□□ -2.03
CDX2Q99626 AC087808.1-201ENST00000520501 361 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 AP001189.2-201ENST00000527320 189 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.36□□□□□ -2.03
CDX2Q99626 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.36□□□□□ -2.03
CDX2Q99626 HIGD1AP17-201ENST00000554576 276 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.36□□□□□ -2.03
CDX2Q99626 MED28P6-201ENST00000558776 231 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 HSPE1P3-201ENST00000559254 309 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.36□□□□□ -2.03
CDX2Q99626 MIR3912-201ENST00000577566 105 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.36□□□□□ -2.03
CDX2Q99626 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.36□□□□□ -2.03
CDX2Q99626 AC020895.1-201ENST00000595362 272 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.36□□□□□ -2.03
CDX2Q99626 AP001330.4-201ENST00000604350 154 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 NUTF2P8-201ENST00000604593 363 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 AC009237.15-201ENST00000610252 501 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 AC069234.5-201ENST00000611056 416 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 AC010378.1-201ENST00000619270 362 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 AC095031.1-201ENST00000623685 672 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 AC010872.1-201ENST00000624225 675 ntBASIC2.36□□□□□ -2.03
CDX2Q99626 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.36□□□□□ -2.03
CDX2Q99626 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CDX2Q99626 AC090740.1-201ENST00000623193 2262 ntBASIC2.35□□□□□ -2.03
CDX2Q99626 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
CDX2Q99626 Y_RNA.25-201ENST00000362528 102 ntBASIC2.35□□□□□ -2.03
CDX2Q99626 RNU5D-1-201ENST00000363299 116 ntBASIC2.35□□□□□ -2.03
CDX2Q99626 snoZ40.1-201ENST00000364540 72 ntBASIC2.35□□□□□ -2.03
CDX2Q99626 RNU6-298P-201ENST00000390888 96 ntBASIC2.35□□□□□ -2.03
CDX2Q99626 AL590004.2-201ENST00000404787 371 ntBASIC2.35□□□□□ -2.03
CDX2Q99626 AL355143.1-201ENST00000407101 841 ntBASIC2.35□□□□□ -2.03
CDX2Q99626 AC068533.2-201ENST00000411872 306 ntBASIC2.35□□□□□ -2.03
CDX2Q99626 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.35□□□□□ -2.03
CDX2Q99626 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.35□□□□□ -2.03
CDX2Q99626 MTND2P5-201ENST00000432656 1006 ntBASIC2.35□□□□□ -2.03
CDX2Q99626 DNAJC19P4-201ENST00000440115 345 ntBASIC2.35□□□□□ -2.03
CDX2Q99626 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.35□□□□□ -2.03
CDX2Q99626 RPL39P40-201ENST00000445481 146 ntBASIC2.35□□□□□ -2.03
CDX2Q99626 AC009237.8-201ENST00000445492 379 ntBASIC2.35□□□□□ -2.03
CDX2Q99626 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
CDX2Q99626 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.35□□□□□ -2.03
CDX2Q99626 RFC5P1-201ENST00000454419 874 ntBASIC2.35□□□□□ -2.03
CDX2Q99626 SUMO2P2-201ENST00000456482 255 ntBASIC2.35□□□□□ -2.03
CDX2Q99626 AC126182.1-201ENST00000478134 357 ntBASIC2.35□□□□□ -2.03
CDX2Q99626 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.35□□□□□ -2.03
CDX2Q99626 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.35□□□□□ -2.03
CDX2Q99626 RNU6-415P-201ENST00000516252 97 ntBASIC2.35□□□□□ -2.03
CDX2Q99626 RNA5SP76-201ENST00000516277 87 ntBASIC2.35□□□□□ -2.03
CDX2Q99626 HSPA8P13-201ENST00000523715 472 ntBASIC2.35□□□□□ -2.03
CDX2Q99626 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
CDX2Q99626 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.35□□□□□ -2.03
CDX2Q99626 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CDX2Q99626 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.35□□□□□ -2.03
CDX2Q99626 FAM60BP-201ENST00000578364 658 ntBASIC2.35□□□□□ -2.03
CDX2Q99626 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.35□□□□□ -2.03
CDX2Q99626 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.35□□□□□ -2.03
CDX2Q99626 AC024257.5-201ENST00000612739 531 ntBASIC2.35□□□□□ -2.03
CDX2Q99626 AC107871.2-201ENST00000612894 502 ntBASIC2.35□□□□□ -2.03
CDX2Q99626 AP003476.1-201ENST00000623984 516 ntBASIC2.35□□□□□ -2.03
CDX2Q99626 MIR1322-201ENST00000638013 71 ntBASIC2.35□□□□□ -2.03
CDX2Q99626 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.35□□□□□ -2.03
CDX2Q99626 AL513185.3-201ENST00000433335 1300 ntBASIC2.35□□□□□ -2.03
CDX2Q99626 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.34□□□□□ -2.03
CDX2Q99626 AC009812.4-201ENST00000569134 1805 ntBASIC2.34□□□□□ -2.03
CDX2Q99626 SNORA40.18-201ENST00000391200 128 ntBASIC2.34□□□□□ -2.03
CDX2Q99626 SNORD88.1-201ENST00000408684 91 ntBASIC2.34□□□□□ -2.03
CDX2Q99626 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms